Jatropha Genome Database

JcCB0067131.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0067131.10 - phase: 0 /partial
         (550 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004501 conserved hypothetical protein                          295   1e-79

>29929.m004501 conserved hypothetical protein
          Length = 3198

 Score =  295 bits (149), Expect = 1e-79
 Identities = 365/437 (83%)
 Strand = Plus / Plus

                                                                       
Query: 25  gacgaccgctctgccacacttagcggtggaggttaccgagatgcggaggcactattccgt 84
           ||||||||||||||||| || ||||| ||||| | | ||||||| ||| |||||||||||
Sbjct: 25  gacgaccgctctgccactctaagcggcggaggattcagagatgcagagacactattccgt 84

                                                                       
Query: 85  tcgaaaccgatttcccaaattcggaatgtggaagccacaacaagaaaacagattcaggac 144
           || ||| | |||||  |||| || |||||||||||||| || |||||||||||  | || 
Sbjct: 85  tccaaaaccatttcggaaatacgcaatgtggaagccaccaccagaaaacagatcgacgat 144

                                                                       
Query: 145 aagaaggaggagctccgccaattggtcggaaaccgctacagagacctcattgactccgcc 204
           ||||||||||||||||| |||||||| || |||||||||||||||||||| ||||| || 
Sbjct: 145 aagaaggaggagctccgtcaattggttggcaaccgctacagagacctcatcgactcagct 204

                                                                       
Query: 205 gactcaatcgtcctcatgaagtcttcgtgcgagtccatctcttctaatgtagcttctatc 264
           ||||| || |||||||||||||| || ||| | |||||||  |||||| ||||||| |||
Sbjct: 205 gactctattgtcctcatgaagtcatcttgccattccatctactctaatatagcttccatc 264

                                                                       
Query: 265 caaagtaacattctctccctctcttcatctcctgtatcagaaacccccaaatttaccaac 324
           || | |||||||  |||||||||| |||||||||| ||  | ||||||||||| ||||||
Sbjct: 265 cagactaacattacctccctctctgcatctcctgtttcccagacccccaaattcaccaac 324

                                                                       
Query: 325 tctaaccccgtccgcatccgaatctacgggatcgcctgtcgcgtcaagtatttagttgac 384
            | || || |  ||  |  |||||||||||||||||||||| ||||| || || || || 
Sbjct: 325 cccaatcctgctcgtcttagaatctacgggatcgcctgtcgggtcaaatacttggtcgat 384

                                                                       
Query: 385 actcctgagaacatctggggatgcctcgatgagtccatgtttctggaagcggccggaaga 444
           ||||| ||||||||||||||||||||||| |||||||||||||| ||||| || |  |||
Sbjct: 385 actcccgagaacatctggggatgcctcgacgagtccatgtttctcgaagctgctgccaga 444

                            
Query: 445 tatattcgtgccaagca 461
           || ||||| ||||||||
Sbjct: 445 tacattcgagccaagca 461