Jatropha Genome Database

JcCB0065971.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0065971.10 + phase: 0 
         (489 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29950.m001121 superoxide dismutase [cu-zn], putative                  250   7e-66

>29950.m001121 superoxide dismutase [cu-zn], putative
          Length = 438

 Score =  250 bits (126), Expect = 7e-66
 Identities = 318/382 (83%)
 Strand = Plus / Plus

                                                                       
Query: 22  acagcgaaagcggtggcactcataacaggagaacccaatgttagaggctctattcacttc 81
           |||| |||||||||||| || ||||| ||||| ||  |||||| ||||||| |||| || 
Sbjct: 16  acagtgaaagcggtggctcttataacgggagaccctcatgttaaaggctctcttcagttt 75

                                                                       
Query: 82  gtccaacgccccaatggccctacccatgtgacagggaggataacaggcctatctccaggt 141
            | || |   || |||| |||||| |||| |||||||||||| |||| ||||| || || 
Sbjct: 76  atacagcaaacccatgggcctacctatgtaacagggaggatatcaggtctatcacctggc 135

                                                                       
Query: 142 cttcatggcttccatattcatgcttttggtgacaccaccaatggctgcaattctactgga 201
           |||||||| ||||||||||||||| |||| || |||||||||||||||||||| ||||||
Sbjct: 136 cttcatgggttccatattcatgctcttggcgataccaccaatggctgcaattcaactgga 195

                                                                       
Query: 202 cctcatttcaatccattcaagaaggaccatggagctccaactgataaagaacgtcatgcg 261
           || || |  |||||||| |||| | ||||||||||||||    || ||||||| ||||| 
Sbjct: 196 ccgcactataatccattaaagaggaaccatggagctccattccatgaagaacgccatgca 255

                                                                       
Query: 262 ggcgatttgggcaatattgttgttgggccagatggaattgctgaggtttcagttaaagac 321
           || ||||||||||| |||||   |||  | ||||||||||||||| ||||| |||| |||
Sbjct: 256 ggggatttgggcaacattgtcactggctccgatggaattgctgagatttcaattaaggac 315

                                                                       
Query: 322 atgcagataccgctgagtgggccacattcaatattggggagggctgttgttgtacatgct 381
           |||||||||||||||| |||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 316 atgcagataccgctgactgggccgcattccatattggggagggctgttgttgtgcatgct 375

                                 
Query: 382 gatcctgacgatcttggaaaag 403
           || || || |||||||| ||||
Sbjct: 376 gaccccgatgatcttgggaaag 397