Jatropha Genome Database
- JcCB0065751.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0065751.10 - phase: 0 /partial
(1263 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29739.m003769 conserved hypothetical protein 662 0.0
>29739.m003769 conserved hypothetical protein
Length = 2055
Score = 662 bits (334), Expect = 0.0
Identities = 565/642 (88%)
Strand = Plus / Plus
Query: 622 gttggtgaattctcaggtatctggtccaaacccaacagtgagaatttcactcagtgtatt 681
|||||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 634 gttggtgatttctcaggaatctggtccagacccaacagtgagaatttcacccagtgtatt 693
Query: 682 ggccagtcaaagagccagaaaaagctggatccaaagacaaacggttacattcttataaat 741
| ||| |||| |||| |||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 694 gaccaatcaagaagccgcaaaaagctggatgcaaagacaaacggttacattctcataaat 753
Query: 742 gcaaatggtggcttaaatcagatgagatttgggatctgtgatatggttgctgtcactaag 801
|| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 754 gctaatggtggcttaaatcagatgagatttgggatttgtgatatggttgctgtggctaag 813
Query: 802 attatgaaggcgacgcttgttctcccgtctctcgatcatacctcctactgggctgatgaa 861
||||||||||| || |||||||| || ||||| ||||| |||||||||||||||||||||
Sbjct: 814 attatgaaggcaacacttgttcttccttctctggatcacacctcctactgggctgatgaa 873
Query: 862 agtggctttaaggatctcttcaattggcaacattttattgaaacattgaagaatgatata 921
|||||||| |||||||| |||||||||||| | || || || |||||||||||||||||
Sbjct: 874 agtggcttcaaggatctattcaattggcaatacttcatcgacacattgaagaatgatatc 933
Query: 922 cacattgtggaggcattaccacctgcctatgctgcaattgagccttttatgaaaacacct 981
|||||||| ||| ||||||| |||| ||||||| ||| || ||| ||| ||||||||
Sbjct: 934 cacattgttgagacattaccgcctgaatatgctggaatcgaacctcttacaaaaacacca 993
Query: 982 atatcttggtctaaggttagttattataaaactgaagtcctgccattgttgaagcagcac 1041
|| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 994 atttcttggtctaaggttagttattataaaactgaggtcctgccactgttgaagcagcac 1053
Query: 1042 aaagttatgtactttactcacactgattctcggcttgccaacaatgatatccgagaatcc 1101
||||| || || || ||||||||||||||||| ||||||||||||| | | || |||
Sbjct: 1054 aaagtaatctatttcactcacactgattctcgccttgccaacaatgggcttcccgattcc 1113
Query: 1102 atacaaaagctgagatgccgtgttaattacagagcattaagatattctgaaccaatagaa 1161
||||| | ||||||||||||||||||||| || ||||| | || |||||||||||||||
Sbjct: 1114 atacagaggctgagatgccgtgttaattatagggcattgaagtactctgaaccaatagaa 1173
Query: 1162 gagctgggaaatgtcttggtgtccagaatgagagaaagtggaagcccttatcttgctctt 1221
|| || ||||| ||||| | || ||||||||| ||| ||||||||| |||||||||||
Sbjct: 1174 gaacttggaaacatcttgatctctagaatgagacaaaatggaagcccgtatcttgctctc 1233
Query: 1222 catttgaggtatgagaaggatatgcttgcatttactggctgc 1263
||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1234 catttgaggtatgagaaggatatgcttgcatttacaggctgc 1275
Score = 85.7 bits (43), Expect = 6e-16
Identities = 103/123 (83%)
Strand = Plus / Plus
Query: 354 ggagttggggttgagagagaagaagaagttggggcatttgatgttctttgtgttttgtgg 413
||||||||| || ||||| | |||||| || ||||| || ||||||||| |||| || ||
Sbjct: 360 ggagttgggttttagagataggaagaatttagggcaattaatgttctttttgttctgcgg 419
Query: 414 cgtgtgtttgtttctgggtgttctcaagatttgtgccaatggatggtttggatctgccct 473
||||||| ||| |||||||| | ||||||||||| ||||| |||||||||||||| ||
Sbjct: 420 gctgtgtttatttttgggtgtttttaagatttgtgctaatgggtggtttggatctgctct 479
Query: 474 tga 476
|||
Sbjct: 480 tga 482
Score = 79.8 bits (40), Expect = 4e-14
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 24 tagtactgatggcgtttctcagagagttaatagccctcgtttctcgggctctatgactcg 83
||||| |||||| ||||||||||||||||| |||||||| || |||||| | ||||||||
Sbjct: 24 tagtagtgatggagtttctcagagagttaacagccctcgattttcgggcccgatgactcg 83
Query: 84 ccgggctc 91
||||||||
Sbjct: 84 ccgggctc 91