Jatropha Genome Database
- JcCB0065721.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0065721.20 - phase: 0
(1878 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29780.m001321 pentatricopeptide repeat-containing protein, putative 1356 0.0
>29780.m001321 pentatricopeptide repeat-containing protein, putative
Length = 2508
Score = 1356 bits (684), Expect = 0.0
Identities = 1455/1712 (84%)
Strand = Plus / Plus
Query: 1 atgatgcagcagcactggtatcgatttgattttgctctatcaacaaagctagcagattac 60
||||||||||| |||||||||||||||||||||| | | |||||||||||||| |||
Sbjct: 664 atgatgcagcaacactggtatcgatttgattttgggttggctacaaagctagcagactac 723
Query: 61 atgggcaaggagggaaagtttgcaaagtgcagagagttatttgatgatattattaatcag 120
||||| |||||| | |||||||| ||||| || ||| | ||||||||||| |||||||||
Sbjct: 724 atggggaaggagcggaagtttgctaagtgtagggagatttttgatgatatcattaatcag 783
Query: 121 gggcgtgtgcctagtgagtccacttttcacattttggtcattgcatatcttagtgcacca 180
|| ||||||||||| ||||||||||||||||||||| |||||||||||||||| || |||
Sbjct: 784 ggacgtgtgcctagcgagtccacttttcacattttgatcattgcatatcttagcgcgcca 843
Query: 181 gttcaaggttgccttgacgaagcatgtagcatatacaatcgtatgattcagttgggaggt 240
|||||||||||||| || |||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 844 gttcaaggttgcctggaggaagcatgtaccatatacaatcgtatgattcagttaggaggt 903
Query: 241 tacaagccacgacttagtttgcacaattctctctttagagctcttgtgaccaaaccagca 300
||| ||||||| || |||||||||||||||||||||||||| ||||||| |||||||| |
Sbjct: 904 taccagccacggctgagtttgcacaattctctctttagagcccttgtgagcaaaccagga 963
Query: 301 gacacttctaaacgttatctcaagcaggctgagtttatttttcataatttggtgacatct 360
| | | |||| |||||| ||||| ||||| ||||||| |||||||||||||||||||
Sbjct: 964 ggatttgcaaaacattatcttaagcaagctgaatttatttatcataatttggtgacatct 1023
Query: 361 ggacttgagatacagaagcatatctatggtggcctaatatggctgcatagctatcaggac 420
||||||||||||||||| | || ||||| || ||||| ||||| || ||||||||||||
Sbjct: 1024 ggacttgagatacagaacgacatttatgggggactaatttggctacacagctatcaggac 1083
Query: 421 aacatagatagagcaagaattgcatcactaagggaagagatgaagctagcaggaatagaa 480
||||| |||| || ||| ||||||||| |||||||||||||||||| ||||||||||
Sbjct: 1084 aacattgataaagtaaggattgcatcaataagggaagagatgaagcaagcaggaataatg 1143
Query: 481 gagggcagggatgtgcttctgtcaattttgagggcttgctcaaaggatggtgatgtggag 540
|| |||||||| | ||| |||| ||| |||| ||||| || ||||| ||||||||||||
Sbjct: 1144 gaaggcagggaaattcttttgtccattatgagagcttgttcgaaggagggtgatgtggag 1203
Query: 541 gaagcagaagcaacttggctcaaactcctcagaattgatggtggtcctcccacacaagct 600
||||||||| ||| ||||||||||||||| | |||||||||||| ||||||||||||
Sbjct: 1204 gaagcagaaagaacgtggctcaaactcctccaagttgatggtggtctccccacacaagct 1263
Query: 601 tttgtgtatagaatggaagtctttgctaaggttggagaacatatgaaatctttggagata 660
||||| |||||||||||||||||||| ||| ||||||| ||||||||||||||||||| |
Sbjct: 1264 tttgtctatagaatggaagtctttgcaaagcttggagagcatatgaaatctttggagaca 1323
Query: 661 ttcagggaaatgaaggaacgtttgggctctgttagtgtcacaggatatcataaaatcata 720
|||||||||||| |||||| |||||| || ||| | ||| ||||||||||||||||
Sbjct: 1324 ttcagggaaatgcaggaacttttgggttcctctagcattgcagcatatcataaaatcata 1383
Query: 721 gaggtgttatgtcgagctcaggaaatggatttgtcagaatcacttatgcaagagttcatt 780
|||||| || ||| |||||| ||| |||| ||| |||||||||| ||||| || ||||||
Sbjct: 1384 gaggtggtaagtcaagctcaagaagtggaattggcagaatcactaatgcaggaattcatt 1443
Query: 781 gagagtggtatgaagccccttatgccttcttttagtgaactaatgaatttgtacttaaat 840
|||||||| |||||||||| ||||| ||||||| || ||||||||| ||||| | |||
Sbjct: 1444 aagagtggtctgaagcccctcatgccatcttttaccgatctaatgaatatgtaccttaat 1503
Query: 841 ttaaatttgcatgataaactggaatcagtcttctctgcttgccttaagaaatgtcgacca 900
|||||||| ||||| ||| |||| || ||||| ||| ||||| |||| |||||||||
Sbjct: 1504 ttaaatttacatgaaaaattggagtccaccttctttgcatgcctggagaactgtcgacca 1563
Query: 901 aatcgaacaatttacaatatgtacttggattctttggtgaaagttggtaatcttgacaaa 960
|| || | ||||| ||| | |||||||||||||| || ||||||||||||||||||||
Sbjct: 1564 aaccggaatatttataatgtatacttggattctttagtcaaagttggtaatcttgacaag 1623
Query: 961 gcagaggagatcttcacccatatttgtagtggtgagggtgttggtgttactggcagatca 1020
||||| ||| ||||| | |||| |||||| ||| | |||||||| | ||||||
Sbjct: 1624 gcagaagaggccttcaacaatatgtgtagtaatgaagcggttggtgtcaacataagatca 1683
Query: 1021 tgtaatattattctaagtgcatatctctcttctggggaacatgtgaaagcagagaatgtg 1080
|| |||| |||||||| | ||| ||||||||||| || ||||||| |||||||| |
Sbjct: 1684 tgcaataccattctaagaggatacctctcttctggagactatgtgaaggcagagaagata 1743
Query: 1081 tataatctgatgtgccagaagaaatatgatattgaaccctcattgatgcaaaagcttgac 1140
||| |||||||||||||||||||||||||||| ||||||||| | ||| |||| |||||
Sbjct: 1744 tatgatctgatgtgccagaagaaatatgatatcgaaccctcactaatggaaaaacttgat 1803
Query: 1141 tatgtgctaagcttgagcaggaaagaggttaagaagcctgtaagcctcaagatgagcaaa 1200
|||||||| || ||||||||||||| ||||||||||||| ||||||||||| | ||||||
Sbjct: 1804 tatgtgctgagtttgagcaggaaagtggttaagaagcctctaagcctcaagctaagcaaa 1863
Query: 1201 aatcagagagaaattttagtaggcttgctattaggtggtttgcaaattgaatcagatgaa 1260
|||| |||||||||||||| || ||||| ||||||||||||| | |||||||||||||
Sbjct: 1864 gatcaaagagaaattttagtgggattgctgttaggtggtttgcgagttgaatcagatgac 1923
Query: 1261 gaaaggaagagacacatgattcggtttgagttcaatgagaattctagcgtacattctgtt 1320
| ||||||| ||||||||||||||||||||||||||| ||||||||| ||| | ||
Sbjct: 1924 aataggaagaaacacatgattcggtttgagttcaatgaaaattctagcacgcatgccatt 1983
Query: 1321 ttgaggaggcatttatatgatgaataccatgagtggttacacccttcctgtaagcttaat 1380
|||||||| ||| ||||||| | ||||||||||||||||| |||||||||||||||| |
Sbjct: 1984 ttgaggagacatctatatgacaagtaccatgagtggttacatccttcctgtaagcttagt 2043
Query: 1381 gatggcagcgatgatatatcttacagattttctactatctcgcactcttactttggtttc 1440
||||||||||||| | ||||||||||||||||| |||||||||||||| ||| |||||
Sbjct: 2044 gatggcagcgatggtgcttcttacagattttctaccatctcgcactcttattttagtttc 2103
Query: 1441 tatgcagaccagttttggccaaaaggtcgagccattatacctaagttaattcatcggtgg 1500
||||| || ||||||||||||||||||| |||| ||||| ||| ||||||||||||||
Sbjct: 2104 tatgccgagcagttttggccaaaaggtcagcccatgataccaaagctaattcatcggtgg 2163
Query: 1501 ttatcaccacaggttcttgcatactggtatatgtatggaggtcacagaacatcatctggg 1560
|| || ||||| |||||||| | |||||| ||||||| |||||||||||| || || |||
Sbjct: 2164 ttgtcgccacaagttcttgccttctggtacatgtatgcaggtcacagaacctcttcaggg 2223
Query: 1561 gatatcttgctgaagctgaaaggaagtcgcgaaggtgttgcaaaggttgtcaaagcattc 1620
||||| ||| ||||||||||||||||| | || ||||| | ||||||| ||||| ||||
Sbjct: 2224 gatattttgttgaagctgaaaggaagtagggagggtgtagaaaaggttttcaaaacattg 2283
Query: 1621 aaagcaaaatctctcagttgcagggtgaaggtgaagggaagagtgttttggataggcttt 1680
||| |||||||||||| |||| |||||| || |||||||| || ||||||||||||
Sbjct: 2284 aaatcaaaatctctcaactgcaaggtgaaaagaaaaggaagagttttctggataggcttt 2343
Query: 1681 ctaggaagtgattccatatggttctggaaact 1712
|| |||| |||||| ||||||| ||||||||
Sbjct: 2344 ctgggaaatgattctgtatggttttggaaact 2375