Jatropha Genome Database

JcCB0065721.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0065721.10 - phase: 0 
         (318 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29780.m001322 brg-1 associated factor, putative                       172   8e-43

>29780.m001322 brg-1 associated factor, putative
          Length = 1845

 Score =  172 bits (87), Expect = 8e-43
 Identities = 165/191 (86%)
 Strand = Plus / Plus

                                                                       
Query: 16  gacctcgtgacccggcttcgcgaagttctccaggactctgacctcgacacggccaccgcc 75
           |||||||||||||| ||||||||| |||||||||||||||||||  ||||||||||||| 
Sbjct: 16  gacctcgtgacccgacttcgcgaaattctccaggactctgaccttaacacggccaccgct 75

                                                                       
Query: 76  ggcagtatccgccgaaagttggaggaagagttcggcgtcaatttatcggaccggaaagct 135
           |||||| ||||||| ||  |||||||||  ||||||||  ||||||||||  ||||||| 
Sbjct: 76  ggcagtgtccgccggaaactggaggaagttttcggcgttgatttatcggataggaaagca 135

                                                                       
Query: 136 tttattagggaacaaattgacatttaccttgaaactctagagaacaacgataaggaagaa 195
           ||||||||||||||||| |||| |||||| ||||| || |||||  || |||||||||| 
Sbjct: 136 tttattagggaacaaatcgacagttacctcgaaaccctggagaatgacaataaggaagac 195

                      
Query: 196 gaggaagaaga 206
           || ||||||||
Sbjct: 196 gaagaagaaga 206