Jatropha Genome Database

JcCB0063711.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0063711.10 - phase: 2 /partial
         (1183 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28320.m001106 hypothetical protein                                    424   e-118

>28320.m001106 hypothetical protein
          Length = 1224

 Score =  424 bits (214), Expect = e-118
 Identities = 381/436 (87%), Gaps = 3/436 (0%)
 Strand = Plus / Plus

                                                                        
Query: 751  ggaaggtgctcctaatgttgttggcctatttaagggcagttctgatgacacatgttctat 810
            ||||||||| ||||||||||| || |||||||| |||||||||||||||  ||||||| |
Sbjct: 786  ggaaggtgcgcctaatgttgtcggtctatttaaaggcagttctgatgacgtatgttctgt 845

                                                                        
Query: 811  gaacaaatatgattgtgacttggctgatcttcctgcgataattctgcagcaggttgcaag 870
            |||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 846  gaacaaatatgactgtgatttggctgatcttcctgtgataattctgcagcaggttgctag 905

                                                                        
Query: 871  ccaggtaatccgctggcttcatgaggaagctcttacggtgggaataaaagcaaatcgtga 930
            |||||| ||||||||||||||||||||||||||| | |||||||| ||||||||||| ||
Sbjct: 906  ccaggttatccgctggcttcatgaggaagctctttcagtgggaattaaagcaaatcgcga 965

                                                                        
Query: 931  ctttctaagcttgtccttcgagttggatcaaggtgaagtactgagcatggtggcacatgt 990
            ||||||| ||||||| || |||||||| || ||||||||||||||| |||||||||||||
Sbjct: 966  ctttctatgcttgtcatttgagttggaacagggtgaagtactgagcctggtggcacatgt 1025

                                                                        
Query: 991  ggatccagaagacgttgaagggtgcatctcatggtggttggtaatggaagacggttttgc 1050
            ||| || |||||   |||||||||||| || |||||||| || |||||||| || |||||
Sbjct: 1026 ggaccctgaagatactgaagggtgcatatcctggtggttagtgatggaagatggctttgc 1085

                                                                        
Query: 1051 a---gagaagaaacttcatatggacattgcagacgatgcatctgaatgcaggaagttctt 1107
            |   |||| ||||||||||||||| ||||| || || ||||||||||  || ||||||||
Sbjct: 1086 agaggagaggaaacttcatatggatattgctgatgaagcatctgaatatagaaagttctt 1145

                                                                        
Query: 1108 ggggtatttacctcttgatgttttatactcaacgctgatggatctggttactttgtgcag 1167
            ||| ||||||||||||||  | ||||||||||  |||||| ||||||||| ||| |||||
Sbjct: 1146 gggatatttacctcttgacatcttatactcaatactgatgaatctggttagtttatgcag 1205

                            
Query: 1168 tggaggtggcagccat 1183
            ||| ||||| ||||||
Sbjct: 1206 tgggggtgggagccat 1221