Jatropha Genome Database

JcCB0062531.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0062531.10 - phase: 0 
         (375 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29680.m001665 conserved hypothetical protein                          131   3e-30
29680.m001666 conserved hypothetical protein                          101   3e-21

>29680.m001665 conserved hypothetical protein
          Length = 402

 Score =  131 bits (66), Expect = 3e-30
 Identities = 102/114 (89%)
 Strand = Plus / Plus

                                                                       
Query: 82  aagattacatatatttccaacccaacaatggtaagagctactaatgcttctgagtttaga 141
           ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||| ||
Sbjct: 85  aagattacatatatttccaacccaacattggttagagctaccaatgcttctgagtttcga 144

                                                                 
Query: 142 gcaattgttcaagaattgactggtaaagattccaagattttagattcttgggat 195
           ||||||||||||||||| || || ||||| |||||  | |||||| ||||||||
Sbjct: 145 gcaattgttcaagaattaacaggcaaagactccaaagtgttagatacttgggat 198


>29680.m001666 conserved hypothetical protein
          Length = 411

 Score =  101 bits (51), Expect = 3e-21
 Identities = 93/107 (86%)
 Strand = Plus / Plus

                                                                       
Query: 80  tcaagattacatatatttccaacccaacaatggtaagagctactaatgcttctgagttta 139
           |||||||||| || ||||||| |||||||||||| |||||| |||| |||||||||||| 
Sbjct: 89  tcaagattacttacatttccagcccaacaatggttagagctgctaacgcttctgagtttc 148

                                                          
Query: 140 gagcaattgttcaagaattgactggtaaagattccaagattttagat 186
           ||||||| |||||||||||||| || || ||||| ||  ||||||||
Sbjct: 149 gagcaatcgttcaagaattgacgggcaaggattctaaagttttagat 195