Jatropha Genome Database
- JcCB0060901.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0060901.10 + phase: 0 /partial
(872 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29933.m001418 Anaphase-promoting complex subunit, putative 650 0.0
>29933.m001418 Anaphase-promoting complex subunit, putative
Length = 2292
Score = 650 bits (328), Expect = 0.0
Identities = 475/524 (90%)
Strand = Plus / Plus
Query: 346 tctccccaagaggagtttctgagccttttaggtggcgctcggactagtcctgcagtacat 405
|||||||| |||||||||||||||||||||||||| ||||| |||||||| ||| |||||
Sbjct: 964 tctccccaggaggagtttctgagccttttaggtggtgctcgcactagtccagcaatacat 1023
Query: 406 caatttctggttaatactcttggtgaagtgggtgtgaagcgtgtatcaaaagttgtttgt 465
|||||||||||||||| |||||||||| ||||||| |||||||| |||||||||||||||
Sbjct: 1024 caatttctggttaatagtcttggtgaattgggtgtcaagcgtgtttcaaaagttgtttgt 1083
Query: 466 ggtgctgggaaagaacttcagcgtattgttcttgatcatattcagcctgctgcagaaata 525
|||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1084 ggtgctggaaaagaacttcagcgtattgttcttgatcatatgcagcctgctgcagaaatt 1143
Query: 526 attgcatttagaatgggagaactaagaggcctgtcaagatggcgtgctcgctaccaaggt 585
|||| || || ||||||||||||||||| || ||||||||||| || ||||||||||||
Sbjct: 1144 gttgctttcaggatgggagaactaagaggtctttcaagatggcgggcacgctaccaaggt 1203
Query: 586 attggtttggatgagatgctcatcaataatgcaacagaaaaatcaggcatgatgctagta 645
|||||||| ||||||||||| ||| ||||||||||||||||||| |||||||| ||||||
Sbjct: 1204 attggtttagatgagatgcttatcgataatgcaacagaaaaatctggcatgatactagta 1263
Query: 646 caaattgaacggtttatgagggttctttcatccgtggagcaacagttctcaaatttcttc 705
||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 1264 caaattgaacggtttatgagggtactctcatctgtggagcaacagttttcaaatttcttc 1323
Query: 706 aattggctgcttaaatgtataaaactacttatgcaagaaccaagtgatcagcttctgcca 765
| |||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 1324 agttggcttcttaaatgtataaagctacttatgcaagaaccaagcgatcagcttctgccg 1383
Query: 766 tacaacagcgaacttgttgtcatattcttgaagttcttatatgatcaagatccagtaagg 825
|||| ||| ||||| |||||||||||||| || |||||||| ||||||||||| || |||
Sbjct: 1384 tacagcagtgaactcgttgtcatattcttaaaattcttatacgatcaagatccggttagg 1443
Query: 826 cagttgctagaactatctgaagtcagtcataatattgaagttga 869
||| |||| |||||| ||||||| | ||| |||||||||||||
Sbjct: 1444 cagctgctggaactaactgaagttggccatgatattgaagttga 1487
Score = 262 bits (132), Expect = 3e-69
Identities = 257/300 (85%), Gaps = 9/300 (3%)
Strand = Plus / Plus
Query: 25 gctttgtcaaaagaccttcgtcatatgattgtcatgtgctcaggagaacttaatgataat 84
|||||||||||||||||| ||||| ||||||||||||||||||||||| | | ||| |||
Sbjct: 601 gctttgtcaaaagacctttgtcatttgattgtcatgtgctcaggagaattcagtgaaaat 660
Query: 85 atggttggatcgagagaaaatcaaatggctggggatgttatgcatgggtcacatggctta 144
||||||| ||| ||||||| ||||||| ||||| ||||| |||||| | |||
Sbjct: 661 atggttgaatcaagagaaagtcaaatgactggg---------catggctcacatagttta 711
Query: 145 gttcttgatacttccatcttctcaaagaggaaaagtgagctccatcaattggcccaacaa 204
|| ||||||||||| || || | |||||||||| || |||||||| ||||||||||||
Sbjct: 712 gtgcttgatacttctatattttttaagaggaaaaacgaactccatcagttggcccaacaa 771
Query: 205 gcttctaatattgaggagttaaccgaggttatccgggcatcattatcagtgatgtcaaca 264
|||||||| |||||||| ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 772 gcttctaacattgaggaattaactgaggttatccgggcatcattatcagttatgtcaaag 831
Query: 265 cagtggtcagatgccatgcgtgtgtttcatgagaagtttgattcgctatctaatttgatt 324
|||||||||||||||||||| |||||||||||||||||| ||| ||||||| |||||||
Sbjct: 832 cagtggtcagatgccatgcgcatgtttcatgagaagtttggttctctatctactttgatt 891