Jatropha Genome Database

JcCB0060791.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0060791.20 - phase: 2 /pseudo/partial
         (283 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29780.m001318 conserved hypothetical protein                          161   3e-39

>29780.m001318 conserved hypothetical protein
          Length = 573

 Score =  161 bits (81), Expect = 3e-39
 Identities = 153/177 (86%)
 Strand = Plus / Plus

                                                                       
Query: 44  gatgcagaagttccatggcatctgattgccatagcaatattttttaccttgatcaaattg 103
           |||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||||||
Sbjct: 337 gatgcagaagttccatggcatctgattgccattgcaatatttttcagtttgatcaaattg 396

                                                                       
Query: 104 ccggggccatgttatccatactggggacgcatttttgttccacacattgctaatggggtg 163
           || || |||| ||| ||||||||||||||||| ||| | |||||| |||| |||||||||
Sbjct: 397 cctggtccatattacccatactggggacgcatatttataccacactttgcaaatggggtg 456

                                                                    
Query: 164 ctatggagaactctgtggtctgcatttctgtggtttagaagacccagaaagggatca 220
            | ||||||||| | ||||| || ||| |||||| ||||| |||| |||||| ||||
Sbjct: 457 ttgtggagaactatatggtcggcttttttgtggtatagaaaaccccgaaaggcatca 513