Jatropha Genome Database
- JcCB0058851.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0058851.10 + phase: 0 /pseudo/partial
(804 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013613 Auxin-responsive protein IAA19, putative 583 e-166
29844.m003175 Auxin-responsive protein IAA4, putative 161 8e-39
28179.m000461 transcription factor, putative 123 2e-27
29912.m005483 Auxin-responsive protein IAA27, putative 98 1e-19
29598.m000461 Auxin-induced protein 22D, putative 94 2e-18
30146.m003546 Auxin-responsive protein IAA27, putative 80 2e-14
29883.m001992 Auxin-induced protein 22E, putative 72 6e-12
29598.m000460 Auxin-responsive protein IAA16, putative 70 2e-11
30008.m000799 Auxin-responsive protein IAA13, putative 66 3e-10
29841.m002749 Auxin-responsive protein IAA1, putative 62 5e-09
29844.m003174 Auxin-responsive protein IAA7, putative 56 3e-07
29637.m000735 Auxin-responsive protein IAA13, putative 54 1e-06
>30170.m013613 Auxin-responsive protein IAA19, putative
Length = 1125
Score = 583 bits (294), Expect = e-166
Identities = 582/677 (85%), Gaps = 17/677 (2%)
Strand = Plus / Plus
Query: 61 ctcttcagtacagaaaaatgttgtttcggggtaacaaaagagggttctctgatgctatgg 120
||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 336 ctcttcaacacagaaaaatgttgtttcaggc-aacaaaagagggttctctgatgctatgg 394
Query: 121 atggggttctcagagggcaaatttctttctaatgcagaagtgaatgtgatgctatcaccc 180
||||| ||||||||||| || || ||| || ||||||||||||||||||
Sbjct: 395 atggg-ttctcagagggtaagtt------------agaggttaatgtgatgctatcaccc 441
Query: 181 agaccctctccaaacttgggattgaaacctggttctgtgcttgagaactttgggagtcaa 240
|| ||||||||||| |||||||||||||||||||||| ||||||||||||||| | ||
Sbjct: 442 aggccctctccaaatttgggattgaaacctggttctgcacttgagaactttgggcctgaa 501
Query: 241 gcagctaaagtgaaagacactgtcgccccaaaatcaacacaggaaaggcctgatggaaca 300
|| |||||||||||||| || | ||||| | | | ||| |||| | ||||||||
Sbjct: 502 gcggctaaagtgaaagatgtagttacaccaaagggagcgctggagaggcatcatggaaca 561
Query: 301 aatgagaccagaccgaaccacagtgcttctgcaaataacaacagcagtgcacctgctacc 360
||||| ||||| | ||||||| |||||||||||| ||||| | || ||| |||||||
Sbjct: 562 aatgatgccagatcaaaccacaatgcttctgcaaacaacaataaca---cacttgctacc 618
Query: 361 aaggcacaagttgtgggttggccacctatcagatcgtttaggaagaactctctcgccacc 420
|||||||| |||||||||||||||||| |||||| ||| |||||||||||||| || |||
Sbjct: 619 aaggcacaggttgtgggttggccacctgtcagattgttcaggaagaactctcttgctacc 678
Query: 421 acatcaaagaacactgaagaggtggatggaaaaggagggcctagtggtttgtttgtaaag 480
| |||||||| |||||||| |||||||| |||| ||||||| | | ||||||||| |||
Sbjct: 679 gcgtcaaagaagactgaagaagtggatggtaaagcagggcctggggctttgtttgtcaag 738
Query: 481 gttagcatggatggtgctccttacttgaggaaagttgacttgagaaactattctgcatac 540
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 739 gttagcatggatggtgctccttacttgaggaaagttgacttgagaaactactctgcatat 798
Query: 541 caggaattatcttctgccctcgagaagatgttcagttgctttacaataggtcaatatgga 600
|||||| ||||||||||||| |||||||||||||| |||||||| |||||||||||||||
Sbjct: 799 caggaactatcttctgcccttgagaagatgttcagctgctttactataggtcaatatgga 858
Query: 601 tctcatggaggtttgggaagagagatgctgagtgagagcaagctgaaggatctgcttcat 660
| |||||| | | |||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct: 859 gcacatggacctctcggaagagaaatgctgagtgaaagcaagctgaaggatctacttcat 918
Query: 661 ggctcagaatatgttcttacatatgaggataaagatggtgattggatgcttgttggagat 720
||||||||||||||||| || ||||| |||||||||||||| |||||||||||||| |||
Sbjct: 919 ggctcagaatatgttctcacttatgaagataaagatggtgactggatgcttgttggcgat 978
Query: 721 gttccatgggaaatgtt 737
||||||||||| |||||
Sbjct: 979 gttccatgggagatgtt 995
>29844.m003175 Auxin-responsive protein IAA4, putative
Length = 576
Score = 161 bits (81), Expect = 8e-39
Identities = 126/141 (89%)
Strand = Plus / Plus
Query: 664 tcagaatatgttcttacatatgaggataaagatggtgattggatgcttgttggagatgtt 723
|||||||||| | ||| |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 433 tcagaatatgcgcctacttatgaggacaaagatggtgactggatgcttgttggagatgtt 492
Query: 724 ccatgggaaatgttcatgtcatcttgcaaaagattaagaattatgaaaggatcagaagca 783
|||||||| ||||| |||||||| |||||||| || ||||| ||||||||||| ||||||
Sbjct: 493 ccatgggatatgtttatgtcatcctgcaaaaggttgagaatcatgaaaggatcggaagca 552
Query: 784 agaggtttgggttgtggagta 804
||||| ||||| |||||||||
Sbjct: 553 agaggcttgggctgtggagta 573
>28179.m000461 transcription factor, putative
Length = 1149
Score = 123 bits (62), Expect = 2e-27
Identities = 305/386 (79%)
Strand = Plus / Plus
Query: 352 cctgctaccaaggcacaagttgtgggttggccacctatcagatcgtttaggaagaactct 411
|||||| |||||||||| ||||| |||||||| || || | || |||||||||||| ||
Sbjct: 670 cctgctgccaaggcacaggttgttggttggcctccaattaagtcatttaggaagaacact 729
Query: 412 ctcgccaccacatcaaagaacactgaagaggtggatggaaaaggagggcctagtggtttg 471
| || ||||| || ||||||| ||| || || ||||||||| ||| ||| || | |
Sbjct: 730 ttggctaccacttcgaagaacaatgacgaagttgatggaaaaccaggtcctggtactctc 789
Query: 472 tttgtaaaggttagcatggatggtgctccttacttgaggaaagttgacttgagaaactat 531
||||| ||||| ||||||||||| |||||||| ||| |||| || || | |||| ||
Sbjct: 790 tttgtcaaggtcagcatggatggcgctccttatttgcggaaggtagatctaagaactcat 849
Query: 532 tctgcataccaggaattatcttctgccctcgagaagatgttcagttgctttacaataggt 591
|| | ||||| ||| | ||| ||| || |||||||||||||| || ||||| || |||
Sbjct: 850 tccacctaccaagaactctctcgtgctcttgagaagatgttcagctgttttaccatcggt 909
Query: 592 caatatggatctcatggaggtttgggaagagagatgctgagtgagagcaagctgaaggat 651
|||| |||||||||||||| | || || | |||||| ||||| ||| ||| |||
Sbjct: 910 caatgtggatctcatggagcaccagagagggaaaagctgagcgagagtaagttgagggac 969
Query: 652 ctgcttcatggctcagaatatgttcttacatatgaggataaagatggtgattggatgctt 711
|| || |||| |||||||||| |||||||||||||| ||||||||||| |||||||||
Sbjct: 970 cttctgaatggatcagaatatgcacttacatatgaggacaaagatggtgactggatgctt 1029
Query: 712 gttggagatgttccatgggaaatgtt 737
||||| ||||| |||||||| |||||
Sbjct: 1030 gttggggatgtaccatgggagatgtt 1055
>29912.m005483 Auxin-responsive protein IAA27, putative
Length = 894
Score = 97.6 bits (49), Expect = 1e-19
Identities = 148/181 (81%)
Strand = Plus / Plus
Query: 559 ctcgagaagatgttcagttgctttacaataggtcaatatggatctcatggaggtttggga 618
||||| ||||||||||||||||||||||| ||||||| ||| |||||||||| | |
Sbjct: 622 ctcgaaaagatgttcagttgctttacaattggtcaatgtggttctcatggagttcccagc 681
Query: 619 agagagatgctgagtgagagcaagctgaaggatctgcttcatggctcagaatatgttctt 678
|||| ||||||||||| ||| |||||| || ||||| || |||||||| ||
Sbjct: 682 cgagatggactgagtgagagtcgattgatggatctcctgcatggttctgaatatgtactc 741
Query: 679 acatatgaggataaagatggtgattggatgcttgttggagatgttccatgggaaatgttc 738
|| ||||| || |||||||||||||||||||||||||| |||||||||||| | ||||||
Sbjct: 742 acctatgaagacaaagatggtgattggatgcttgttggtgatgttccatggaagatgttc 801
Query: 739 a 739
|
Sbjct: 802 a 802
Score = 54.0 bits (27), Expect = 1e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 352 cctgctaccaaggcacaagttgtgggttggccacc 386
|||||| ||||||||||||||||||| ||||||||
Sbjct: 409 cctgcttccaaggcacaagttgtgggatggccacc 443
>29598.m000461 Auxin-induced protein 22D, putative
Length = 603
Score = 93.7 bits (47), Expect = 2e-18
Identities = 101/119 (84%)
Strand = Plus / Plus
Query: 679 acatatgaggataaagatggtgattggatgcttgttggagatgttccatgggaaatgttc 738
||||| || |||||||||||||| |||||| | ||||| |||||||||||||| ||||||
Sbjct: 475 acatacgaagataaagatggtgactggatgttggttggcgatgttccatgggatatgttc 534
Query: 739 atgtcatcttgcaaaagattaagaattatgaaaggatcagaagcaagaggtttgggttg 797
|| |||||||| || || ||||| ||||||||||||||||| ||||| |||||||
Sbjct: 535 attaattcttgcaagaggttgagaatcatgaaaggatcagaagctagaggcctgggttg 593
>30146.m003546 Auxin-responsive protein IAA27, putative
Length = 1122
Score = 79.8 bits (40), Expect = 2e-14
Identities = 79/92 (85%)
Strand = Plus / Plus
Query: 646 aaggatctgcttcatggctcagaatatgttcttacatatgaggataaagatggtgattgg 705
|||||||| |||||||| || || |||||||| |||||||| ||||| || ||||||||
Sbjct: 937 aaggatcttcttcatggttctgagtatgttctcacatatgaagataaggacagtgattgg 996
Query: 706 atgcttgttggagatgttccatgggaaatgtt 737
||||||||||| ||||| || ||||| |||||
Sbjct: 997 atgcttgttggtgatgtcccctgggagatgtt 1028
>29883.m001992 Auxin-induced protein 22E, putative
Length = 591
Score = 71.9 bits (36), Expect = 6e-12
Identities = 84/100 (84%)
Strand = Plus / Plus
Query: 682 tatgaggataaagatggtgattggatgcttgttggagatgttccatgggaaatgttcatg 741
||||| || |||||||| ||||||||||||||||||||||| ||||||| ||||| ||
Sbjct: 469 tatgaagacaaagatggcgattggatgcttgttggagatgtcccatggggtatgtttatt 528
Query: 742 tcatcttgcaaaagattaagaattatgaaaggatcagaag 781
|| || ||||| || | ||||| |||||||||||||||
Sbjct: 529 tcctcatgcaagaggctgcgaattgtgaaaggatcagaag 568
>29598.m000460 Auxin-responsive protein IAA16, putative
Length = 774
Score = 69.9 bits (35), Expect = 2e-11
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 682 tatgaggataaagatggtgattggatgcttgttggagatgttccatgggaaatgttcatg 741
||||| ||||| ||||| || ||||||||||| |||||||| ||||||||||||||| |
Sbjct: 625 tatgaagataaggatggagactggatgcttgtaggagatgtgccatgggaaatgttcgtc 684
Query: 742 tcatcttgcaaaagattaagaattatgaaaggatcagaagcaa 784
|| |||||| | ||||| || ||||||||||| |||||||
Sbjct: 685 aactcatgcaaacggttaaggataatgaaaggatctgaagcaa 727
Score = 52.0 bits (26), Expect = 5e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 361 aaggcacaagttgtgggttggccacc 386
||||||||||||||||||||||||||
Sbjct: 274 aaggcacaagttgtgggttggccacc 299
>30008.m000799 Auxin-responsive protein IAA13, putative
Length = 957
Score = 65.9 bits (33), Expect = 3e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 682 tatgaggataaagatggtgattggatgcttgttggagatgttccatggg 730
||||| |||||||| || || ||||||||||||||||||||||||||||
Sbjct: 796 tatgaagataaagaaggggactggatgcttgttggagatgttccatggg 844
>29841.m002749 Auxin-responsive protein IAA1, putative
Length = 654
Score = 61.9 bits (31), Expect = 5e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 667 gaatatgttcttacatatgaggataaagatggtgattggatgcttgttggagatgttcca 726
|||||||| | ||| ||||| || ||||||||||| |||||| | |||||||||||||||
Sbjct: 487 gaatatgtgcctacttatgaagacaaagatggtgactggatgatggttggagatgttcca 546
Query: 727 tgg 729
|||
Sbjct: 547 tgg 549
>29844.m003174 Auxin-responsive protein IAA7, putative
Length = 546
Score = 56.0 bits (28), Expect = 3e-07
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 359 ccaaggcacaagttgtgggttggccacc 386
||||||||||||||||||||||||||||
Sbjct: 89 ccaaggcacaagttgtgggttggccacc 116
>29637.m000735 Auxin-responsive protein IAA13, putative
Length = 903
Score = 54.0 bits (27), Expect = 1e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 676 cttacatatgaggataaagatggtgattggatgcttgttggagatgttccatggg 730
||||| |||||||| || || || || ||||||||||||||||||||||| ||||
Sbjct: 772 cttacttatgaggacaaggaaggggactggatgcttgttggagatgttccttggg 826