Jatropha Genome Database

JcCB0058711.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0058711.10 - phase: 0 
         (1092 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27772.m000038 s-adenosylmethionine decarboxylase, putative            208   5e-53

>27772.m000038 s-adenosylmethionine decarboxylase, putative
          Length = 903

 Score =  208 bits (105), Expect = 5e-53
 Identities = 333/409 (81%)
 Strand = Plus / Plus

                                                                       
Query: 29  cttctccgataggattcgaaggctttgaaaagcgccttgaaattaccttcaatgaaccac 88
           ||||||| || || |||||||||||||| ||||| || |||||  ||||| | |||||||
Sbjct: 23  cttctccaattggcttcgaaggctttgagaagcgtctcgaaatagccttccaagaaccac 82

                                                                       
Query: 89  ccatcttcaaagaccctactgggcgtggtctacgcgccttgactcggtctcaactcgact 148
           |||| ||||||||||| || |||||||| ||||| ||||| | ||| || || || ||||
Sbjct: 83  ccattttcaaagacccaacagggcgtggcctacgggccttaagtcgttcccagcttgact 142

                                                                       
Query: 149 caattcttgaacctgcttgttgcaccattgtaacccagctttctaactctgagttcgact 208
           |||| || ||||| ||||| |||||||||||| | || || || |||  | |||| ||||
Sbjct: 143 caatcctcgaaccagcttgctgcaccattgtatcacaactctccaacaatcagtttgact 202

                                                                       
Query: 209 cttatgttctctccgagtcaagcttattcgttttcccattcaaaatagtgcttaaaacct 268
           | || || ||||||||||||||  | ||||||| ||| ||||||||||| || ||||| |
Sbjct: 203 catacgtgctctccgagtcaagtcttttcgtttaccctttcaaaatagtcctcaaaactt 262

                                                                       
Query: 269 gtggaactactaaactgcttttgtccatcgaatcgattcttaaactcgccgagtcactct 328
           |||| ||||| || || ||||| |||||| || |||||||   ||| ||||| |||||||
Sbjct: 263 gtggtactacgaagcttcttttatccatcaaaccgattctctcactggccgactcactct 322

                                                                       
Query: 329 cactttctttatttgatgttaactactctagaggcagtttcattttccctaattaccaac 388
           || |  || ||  | ||||| | |||||  | |||| |||||||||||| |||||||| |
Sbjct: 323 cagtggctgtaactcatgttcaatactcacgtggcactttcattttcccaaattaccagc 382

                                                            
Query: 389 ctgcccctcaccggagcttttctgaagaagttaccgccttgaacgagtt 437
           ||||||||||||| ||||| ||||||||||||||| ||||||| |||||
Sbjct: 383 ctgcccctcaccgtagcttctctgaagaagttaccaccttgaatgagtt 431



 Score = 89.7 bits (45), Expect = 3e-17
 Identities = 105/125 (84%)
 Strand = Plus / Plus

                                                                       
Query: 682 ccaagtcacttgatatgtgactttgactttgacccatgtggttattctatgaatggaatt 741
           ||||||||| |||||||||| |||||||||||||||||||| || || |||||||| || 
Sbjct: 649 ccaagtcacgtgatatgtgattttgactttgacccatgtgggtactcgatgaatgggatc 708

                                                                       
Query: 742 gaaggtacagctttctcaacggtgcacgtgaccccagaggatggattcagttacgctagc 801
           || ||  ||| || ||| || || ||||||||||| ||||| || || |||||||| |||
Sbjct: 709 gacggctcaggttactctacagtacacgtgaccccggaggacgggtttagttacgcgagc 768

                
Query: 802 tatga 806
           |||||
Sbjct: 769 tatga 773