Jatropha Genome Database
- JcCB0058681.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0058681.10 + phase: 0
(1104 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27506.m000051 zinc finger protein, putative 172 3e-42
29848.m004493 Salt-tolerance protein, putative 72 8e-12
>27506.m000051 zinc finger protein, putative
Length = 1167
Score = 172 bits (87), Expect = 3e-42
Identities = 264/323 (81%)
Strand = Plus / Plus
Query: 61 agacgttgtgactcctgcaaaacggcacctgctgctgcgttttgccgtgctgactcggct 120
||||| ||||| || |||||||||||| | || || | ||| ||| | ||||||||||||
Sbjct: 58 agacggtgtgattcgtgcaaaacggcagcagcagccgtgttctgcagagctgactcggct 117
Query: 121 tacctttgccttaactgcgattccaagatccacggcgccaataagctcgtttctagacac 180
| ||||| | |||||||| |||| || || | ||| |||||||| ||||| || |||
Sbjct: 118 tttctttgtttaaactgcgacgccaaaattcatgccgctaataagcttgtttccaggcac 177
Query: 181 gagcgcgtttggatgtgtgaggtttgtgagcaagcacctgctgccgtcacttgcaaagcc 240
|| ||||| ||||||||||| || || || |||||||||||||| |||||||| |||||
Sbjct: 178 gaacgcgtgtggatgtgtgaagtatgcgaacaagcacctgctgctgtcacttgtaaagct 237
Query: 241 gacgctgccgctctttgtgtcacgtgcgatgatgatattcactccgctaacccactcgct 300
|| ||||| |||||||||||||| || |||| |||||||||||| ||||| || ||||||
Sbjct: 238 gatgctgctgctctttgtgtcacctgtgatgctgatattcactctgctaatcctctcgct 297
Query: 301 cgccggcatgaacgagttccggttgaaccgttcttcgactccgctgactccattgttaaa 360
||||| || ||||| ||||| || || || ||||||||||| || | || ||||||||
Sbjct: 298 cgccgacacgaacgtgttcctgtcgagcctttcttcgactctgccgggtctattgttaag 357
Query: 361 tcatcgccgtttaattttttagt 383
|| || ||||||||||| |||||
Sbjct: 358 tcctccccgtttaatttcttagt 380
Score = 135 bits (68), Expect = 6e-31
Identities = 104/116 (89%)
Strand = Plus / Plus
Query: 904 agagagaaaagaaagaaccggaaatttgaaaagactatacgttacgcttcccgaaaagct 963
|||||||| |||||||| ||||||| |||||||||||||| || |||||||| ||||||
Sbjct: 967 agagagaagagaaagaataggaaattcgaaaagactatacgctatgcttcccgcaaagct 1026
Query: 964 tatgccgaaacgagaccaagaatcaaaggccggttcgcgaaacgaacagaaattga 1019
|| |||||||| || || ||||||||||||||||||||||||||||| ||||||||
Sbjct: 1027 tacgccgaaacaaggccgagaatcaaaggccggttcgcgaaacgaaccgaaattga 1082
Score = 119 bits (60), Expect = 4e-26
Identities = 144/172 (83%)
Strand = Plus / Plus
Query: 640 aacaacgaaatttgttatgacgttgatttctgtagatcaaagctttcttccctcaactat 699
||||| || ||||||||||| |||||||||||||| |||||||||| || | |||||
Sbjct: 700 aacaatgatatttgttatgatattgatttctgtagaacaaagctttcatcttttaactac 759
Query: 700 ccaactcagtctattagccaaagtgtttcttcatcatcggttgatgtaggagttgtacca 759
|||||||||||| | |||||||| |||||||| |||||| ||||||| || ||||| |||
Sbjct: 760 ccaactcagtctctcagccaaagcgtttcttcttcatcgcttgatgttggggttgttcca 819
Query: 760 gatggaaactctatgtccgatatatcttacccttttggccaaaacataaata 811
||||| | |||| || |||||||| |||||||| |||| |||||| ||||
Sbjct: 820 gatgggagttctacatcggatatatcataccctttcggccgaaacatgaata 871
>29848.m004493 Salt-tolerance protein, putative
Length = 999
Score = 71.9 bits (36), Expect = 8e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 946 tacgcttcccgaaaagcttatgccgaaacgagaccaagaatcaaaggccggttcgcgaaa 1005
||||| || ||||||||||| |||||||| ||||||||||||||||| | |||||||||
Sbjct: 868 tacgcgtcgcgaaaagcttacgccgaaacaagaccaagaatcaaaggaagattcgcgaaa 927
Query: 1006 cgaacaga 1013
|| |||||
Sbjct: 928 cgtacaga 935