Jatropha Genome Database

JcCB0058551.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0058551.10 - phase: 0 
         (396 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29883.m002037 conserved hypothetical protein                          289   6e-78

>29883.m002037 conserved hypothetical protein
          Length = 1503

 Score =  289 bits (146), Expect = 6e-78
 Identities = 274/316 (86%), Gaps = 3/316 (0%)
 Strand = Plus / Plus

                                                                       
Query: 38  ttatgatcttgctgttatttggagatgtctcttcggctcctagta---ctgcttcccctg 94
           |||||||||||||  | ||||| | |||||||||  |||||| ||   || |||| ||||
Sbjct: 50  ttatgatcttgcttctttttggtggtgtctcttcttctcctattatttctacttcacctg 109

                                                                       
Query: 95  caaagattgttagtgggtacttctcaaatgctgtatctgctttcatgaaatggttgtggt 154
           | |||||||| ||||||| ||| ||||||||  | |||| ||||||||||||||| ||||
Sbjct: 110 cgaagattgtaagtgggttcttttcaaatgcactttctgttttcatgaaatggttatggt 169

                                                                       
Query: 155 ctctcaaagccacaactaaaacagcgataactggccgtccgacgatgaagtttgagagtg 214
           |||| |||||||| | ||||||||||||  |||||||||||| ||||||||||||| |||
Sbjct: 170 ctcttaaagccactagtaaaacagcgatttctggccgtccgatgatgaagtttgagggtg 229

                                                                       
Query: 215 ggtatactgtggagaccgtgtttgatggaagcaagctcgggattgagccttactctgtgg 274
           |||||| |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 230 ggtataatgtggaaaccgtgtttgatggaagcaagcttgggatcgagccttactctgtgg 289

                                                                       
Query: 275 aggtgttgcctggtggagagcttctaattttggactctgctaacagtaacatttacagga 334
           ||||||||||    || |||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 290 aggtgttgcccaacggggagcttttaattttggactctgctaatagtaacatttacagga 349

                           
Query: 335 tatcttcctccctgtc 350
           ||||||| || |||||
Sbjct: 350 tatcttcttcactgtc 365