Jatropha Genome Database

JcCB0058191.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0058191.10 + phase: 0 /partial
         (378 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29904.m002965 conserved hypothetical protein                          256   8e-68

>29904.m002965 conserved hypothetical protein
          Length = 1161

 Score =  256 bits (129), Expect = 8e-68
 Identities = 308/367 (83%), Gaps = 3/367 (0%)
 Strand = Plus / Plus

                                                                        
Query: 5    gtgccaatggagctgctgttacttctgtaaccgaaatatcagaaaaacagcacaaagttg 64
            |||||||||||||||| ||| ||||| |||| ||||||||||||| ||| || ||| |||
Sbjct: 788  gtgccaatggagctgcagttgcttctataacagaaatatcagaaacacaacagaaaattg 847

                                                                        
Query: 65   ttaaagaagaaggtgcaacagaagttgaggtatctcaacatcgagtatttctcctagggg 124
            | ||||| |   |||  ||||||||| ||| ||| ||||| || || |||||||| ||||
Sbjct: 848  tgaaagatg---gtgtcacagaagttaagggatcgcaacagcgggtgtttctccttgggg 904

                                                                        
Query: 125  agaatcgatgggaggaaccctctaggcttattggcagagacaaacatgttcatgtgagca 184
            ||||||| ||||| || |||||||||||| |  ||| ||||||||| |||  ||| ||||
Sbjct: 905  agaatcggtgggaagagccctctaggcttgtcagcaaagacaaacaagttggtgtaagca 964

                                                                        
Query: 185  aaaccaaggagaccacgtcaaaatgcctttcctgccgtggggagggccgtctattgtgca 244
            || | |||||  | | | |||| ||||||||||| |||||||||||||||||| ||||||
Sbjct: 965  aaccaaaggattctatgacaaagtgcctttcctgtcgtggggagggccgtctactgtgca 1024

                                                                        
Query: 245  cagaatgtgatgggacgggtgaacctaacattgagcctcagttcttggagtgggtagatg 304
            ||||||| ||||| || || ||||| ||||||||||| ||||||||||| ||||||| ||
Sbjct: 1025 cagaatgcgatggaacaggcgaaccaaacattgagccccagttcttggaatgggtaggtg 1084

                                                                        
Query: 305  agggaacaaagtgtccatactgtgaaggcctcggatacacaatttgtgatgtatgtgaag 364
            ||||||  ||||||||||||||||||||||| |||||||| |  ||||||||||| ||||
Sbjct: 1085 agggaatgaagtgtccatactgtgaaggccttggatacacgacatgtgatgtatgcgaag 1144

                   
Query: 365  gaaaaac 371
            | |||||
Sbjct: 1145 ggaaaac 1151