Jatropha Genome Database

JcCB0057761.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0057761.30 - phase: 0 
         (216 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29726.m004099 conserved hypothetical protein                          208   1e-53

>29726.m004099 conserved hypothetical protein
          Length = 666

 Score =  208 bits (105), Expect = 1e-53
 Identities = 174/197 (88%)
 Strand = Plus / Plus

                                                                       
Query: 20  tcatggaagaattttttgatatatggcaagaggcaatctcaaaaagatcattacctggtc 79
           |||||||||||||| ||||||||||||||||||| || || |||||||||||||| || |
Sbjct: 470 tcatggaagaatttgttgatatatggcaagaggctatatcgaaaagatcattacccgggc 529

                                                                       
Query: 80  attttatgcacatagaacctaactttgctgagtatggtctgttggatcagtatagttcac 139
           | |||||||| |||||| ||||||||||||| |||||||| || ||||| |||| | |||
Sbjct: 530 aatttatgcatatagaaactaactttgctgattatggtctctttgatcactatactccac 589

                                                                       
Query: 140 aacacacagctgtgcagtatgctactgttgtggctcaactgattgcaacacagtcggtac 199
           ||||||||||| ||||||||||||| ||  | ||||||||||||||||||||| ||||||
Sbjct: 590 aacacacagctctgcagtatgctaccgtcatagctcaactgattgcaacacagacggtac 649

                            
Query: 200 aagcaactagaaattag 216
           ||||| | |||||||||
Sbjct: 650 aagcagccagaaattag 666