Jatropha Genome Database

JcCB0055861.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0055861.10 - phase: 0 
         (189 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29838.m001690 mads box protein, putative                               50   5e-06

>29838.m001690 mads box protein, putative
          Length = 186

 Score = 50.1 bits (25), Expect = 5e-06
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                       
Query: 86  tcaagaaagcttacgaactttctactttatgtgatattgagattgctcttatcgtctttt 145
           ||||||||||||| ||||| || ||| | ||||||  |||||| |||||| | |||||||
Sbjct: 86  tcaagaaagcttatgaactatcaactctttgtgatgctgagatagctcttttagtctttt 145

                        
Query: 146 ctcctgctggaaa 158
           || || |||||||
Sbjct: 146 ctgctactggaaa 158