Jatropha Genome Database
- JcCB0053361.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0053361.20 + phase: 0 /partial
(508 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29709.m001223 ribose-phosphate pyrophosphokinase, putative 186 9e-47
30054.m000794 ribose-phosphate pyrophosphokinase, putative 178 2e-44
30054.m000790 ribose-phosphate pyrophosphokinase, putative 131 4e-30
>29709.m001223 ribose-phosphate pyrophosphokinase, putative
Length = 1125
Score = 186 bits (94), Expect = 9e-47
Identities = 140/154 (90%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 229 accaggctccgcattttctctggcactgctaatcctgcactttctcaggaaattgcatgc 288
||||||||||||||||| ||||||||||| |||||||| || |||||||||||||| |||
Sbjct: 265 accaggctccgcattttttctggcactgccaatcctgctctctctcaggaaattgcgtgc 324
Query: 289 tacatgggcctggagcttggaaagatcaaaataaagcgttttgctgatggtgaaatttat 348
|||||||| |||||||||||||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 325 tacatgggtttggagcttggaaagattaaaatcaagcgttttgctgacggtgaaatttat 384
Query: 349 gtccaattgcaagaaagcgtcagaggatgtgatg 382
|| |||||||||| ||| ||||||||||| ||||
Sbjct: 385 gttcaattgcaag-aagtgtcagaggatgcgatg 417
Score = 63.9 bits (32), Expect = 9e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 469 gccaaaaatattactgctgtgattccatattttggttatg 508
|||||||||||||||||||| |||||||||||||| ||||
Sbjct: 424 gccaaaaatattactgctgtcattccatattttggctatg 463
>30054.m000794 ribose-phosphate pyrophosphokinase, putative
Length = 1056
Score = 178 bits (90), Expect = 2e-44
Identities = 219/262 (83%)
Strand = Plus / Plus
Query: 247 tctggcactgctaatcctgcactttctcaggaaattgcatgctacatgggcctggagctt 306
|||||| |||||||||| || ||||||||||||||||| | | ||||| ||||| ||
Sbjct: 133 tctggctctgctaatcccgctctttctcaggaaattgcttcgaatatggggctggaactg 192
Query: 307 ggaaagatcaaaataaagcgttttgctgatggtgaaatttatgtccaattgcaagaaagc 366
|||||| |||| || || || ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 193 ggaaaggtcaacatcaaacgatttgctgatggtgaaatctatgttcaattgcaagaaagt 252
Query: 367 gtcagaggatgtgatgtttatcttgttcaacccacatgtcctcctgcaaatgagaatctt 426
|| |||||||||||||| ||||| | || || || |||||||| || || ||||||||
Sbjct: 253 gttagaggatgtgatgtgtatctattgcagccaacctgtcctccagcgaacgagaatctc 312
Query: 427 atggagcttctgataatgattgatgcttgtcggagagcatcggccaaaaatattactgct 486
||||||||| |||| ||||| ||||| ||| |||||||||| ||||| | |||||||||
Sbjct: 313 atggagcttttgatcatgatagatgcatgtaggagagcatctgccaagaccattactgct 372
Query: 487 gtgattccatattttggttatg 508
|| ||||| |||||||| ||||
Sbjct: 373 gtcattccctattttggatatg 394
>30054.m000790 ribose-phosphate pyrophosphokinase, putative
Length = 1188
Score = 131 bits (66), Expect = 4e-30
Identities = 168/202 (83%)
Strand = Plus / Plus
Query: 307 ggaaagatcaaaataaagcgttttgctgatggtgaaatttatgtccaattgcaagaaagc 366
|||| |||||| | ||| || ||||||||||||||||||||| | |||||| |||| ||
Sbjct: 325 ggaatgatcaacacaaaacgatttgctgatggtgaaatttatcttcaattgaaagagagt 384
Query: 367 gtcagaggatgtgatgtttatcttgttcaacccacatgtcctcctgcaaatgagaatctt 426
|| |||||||||||||| ||||| | || ||||| |||||||| || |||||||||||
Sbjct: 385 gttagaggatgtgatgtgtatctattgcagcccacctgtcctccagcgaatgagaatctc 444
Query: 427 atggagcttctgataatgattgatgcttgtcggagagcatcggccaaaaatattactgct 486
||||||||| |||| ||||| ||||| ||| | ||||| || ||||| | ||| ||||||
Sbjct: 445 atggagcttttgatcatgatagatgcatgtagaagagcttctgccaagactatcactgct 504
Query: 487 gtgattccatattttggttatg 508
|| ||||| |||||||| ||||
Sbjct: 505 gtcattccctattttggatatg 526