Jatropha Genome Database
- JcCB0052901.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0052901.10 + phase: 0 /pseudo/partial
(886 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m011109 hydroxymethylglutaryl-CoA synthase, putative 904 0.0
>30190.m011109 hydroxymethylglutaryl-CoA synthase, putative
Length = 1395
Score = 904 bits (456), Expect = 0.0
Identities = 681/756 (90%)
Strand = Plus / Plus
Query: 1 atggcgaagaatgtaggaattctcgctatggacatctacttccctcctacctgtgttcag 60
||||| |||||||| |||||||||||| |||| ||||| ||||||||||||||||||||
Sbjct: 1 atggcaaagaatgttggaattctcgctttggatatctatttccctcctacctgtgttcaa 60
Query: 61 caggaagcactagaggctcatgacggcgcaagtaaaggaaaatataccgttggacttgga 120
||||||||| | ||||| ||||| || |||||||||||||||||||| |||||||||||
Sbjct: 61 caggaagcattggaggcgcatgatggagcaagtaaaggaaaatatacgattggacttgga 120
Query: 121 caagattgcatggcattttgttctgaagtggaagatgtcatctcgatgagtttgacagct 180
||||||||||||| ||||||| |||| || |||||||||||||| |||||||||||||||
Sbjct: 121 caagattgcatgggattttgtactgaggttgaagatgtcatctccatgagtttgacagct 180
Query: 181 gtttcttcactccttgagaagtataatattgatcctaaacaaattggtcgtctggaagtt 240
||| |||| |||||||| || |||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 gttacttctctccttgacaactataatattgatcctaaacaaattggtcgtttggaagtt 240
Query: 241 ggcagtgaaactgtgattgacaagagcaaatctatcaagaccttcttgatgcaaattttt 300
|| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 241 ggtagtgaaactgtgattgacaagagcaaatctattaagactttcttgatgcaaattttt 300
Query: 301 gagaaatatggaaacactgatgttgaaggtgttgactcaactaatgcctgttatgggggg 360
|||||| |||| || ||||| ||||||||||||||||| ||||||| || ||||| ||
Sbjct: 301 gagaaacatgggaatactgacattgaaggtgttgactcatctaatgcttgctatggagga 360
Query: 361 acagcagctttactcaactgtgtcaactgggttgagagcaactcatgggatggacgctac 420
|| ||||||||| |||| |||||||| ||||||||||| |||||||| ||||||||
Sbjct: 361 actgcagctttattcaattgtgtcaattgggttgagagttcgtcatgggacggacgctat 420
Query: 421 ggacttgtagtgtgtactgacagtgcggtctatgcagaaggtccagcccgacctactgga 480
||||||||||| ||||| || |||||||| || ||||||||||| || || ||||||||
Sbjct: 421 ggacttgtagtttgtaccgatagtgcggtttacgcagaaggtcctgctcggcctactggt 480
Query: 481 ggagctgcagccattgcaattctaataggtccagatgcacctattgcttttgaaagcaaa 540
||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||
Sbjct: 481 ggagctgcagccattgctatgctaataggtccagatgcacctattgcttttgagagcaaa 540
Query: 541 tttagggggagccatatgtctcacacttatgatttttacaagcccaacctggctagtgaa 600
| ||||||||||||||||||||| | ||||||||||||||||||||||| || ||||||
Sbjct: 541 tatagggggagccatatgtctcatgcatatgatttttacaagcccaacctagccagtgaa 600
Query: 601 tacccggttgtggatggcaagctttctcaaacgtgctacctcatggctcttgattcctgc 660
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 601 tatccggttgtggatggcaagctttctcaaacatgctacctcatggctcttgattcttgc 660
Query: 661 tacaaaaatttttgtgccaagtatgagaaattcaagggcaaacaattctctatatctgat 720
||||| |||| |||||||||||||||||||| ||||||||||||||||||| || |||
Sbjct: 661 tacaagcatttctgtgccaagtatgagaaatttgagggcaaacaattctctatttccgat 720
Query: 721 gctgaatattttgtatttcattctccttataacaag 756
||||| ||||||||||||||||||||||||||||||
Sbjct: 721 gctgagtattttgtatttcattctccttataacaag 756