Jatropha Genome Database
- JcCB0052881.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0052881.10 + phase: 0 /pseudo/partial
(849 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29820.m001006 breast cancer type 2 susceptibility protein brca2,... 513 e-145
>29820.m001006 breast cancer type 2 susceptibility protein brca2,
putative
Length = 3471
Score = 513 bits (259), Expect = e-145
Identities = 625/747 (83%)
Strand = Plus / Plus
Query: 41 aggcaactaagcaattggacatggataaagcaattaagaaggctttacaagatgctggca 100
|||||||||||||| |||||||||| ||| |||| ||| ||||| ||||| ||||||
Sbjct: 2549 aggcaactaagcaaatggacatggagaaaacaatcaagggagctttgcaagaggctggct 2608
Query: 101 tacaggagagagaagtaacccccttcttgagggttagagtggttggtttaactagttatc 160
| ||| |||||||| ||||| || |||||||||||||||| || ||||||| | |||
Sbjct: 2609 tgagggaaagagaagtgaccccatttatgagggttagagtggtcggcttaactaataatc 2668
Query: 161 atggtaaagctgttgcaaaagaaggcttaataacaatttggagcccgacagagaaacagc 220
| || || | | ||||||||||||||||||||||||| ||| |||||||| ||
Sbjct: 2669 agggaaagggcatcctcaaagaaggcttaataacaatttggaacccaacagagaagcaaa 2728
Query: 221 gaaatgagctggttgagggacaggcctatgcaatagcaggattgttaccagtgaacgctg 280
|| ||||||||| ||||||||||| ||||| |||||||| | | ||||||||| |||
Sbjct: 2729 aaactgagctggtcgagggacaggcatatgctgtagcaggacttcttccagtgaactctg 2788
Query: 281 actcgaatacactttacctgcaagcaagaggatctacgaccaaatgggaacccttgtctc 340
|||| ||||| |||||| | ||||||||||||||| | ||||||||| |||| |||
Sbjct: 2789 actcaaatacgctttacttacaagcaagaggatctgcaaccaaatggctgtccttatctt 2848
Query: 341 ccctagcaatcaaaaacttccagccttttttcaatcctcgagtatcagtattaatgtcaa 400
||||||||||| || |||| ||||| ||||||| |||||||| |||||||| ||||||
Sbjct: 2849 ccctagcaatccaacactttcagccctttttcagtcctcgagaatcagtatcgttgtcaa 2908
Query: 401 atttgggtgaagttcctctttccagtgaatttgatattgctgcatatgttgtgtatgtgg 460
|||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 2909 atttgggtgaagttcccctttccagtgaatttgatactgctgcttatgttgtgtatgtgg 2968
Query: 461 gagaggtttatacaactgctcagtggaagaaacagtgggtttttgttactgattgctcca 520
|||||||||||||||||||||||||||||||||| ||||||||||| | |||| ||| |
Sbjct: 2969 gagaggtttatacaactgctcagtggaagaaacaatgggtttttgtcattgataactcta 3028
Query: 521 tttctgccttatggtctgaagaattatcaaattctttacttgccatcagcttctgctcac 580
|||| ||||| ||| |||||| |||||||||| ||||||||||||||||||||| |||
Sbjct: 3029 tttcgaccttaaagtcagaagaaatatcaaattccttacttgccatcagcttctgcacac 3088
Query: 581 cttatatagatgatgattcattcaccccaatcaactataatcttgaaggatctgctgttg 640
| | |||| |||||| ||| || | |||||||||| ||| |||| |||| | ||||||
Sbjct: 3089 catgtataaatgatggttcgtttgcaccaatcaactctaaccttgcaggaaccactgttg 3148
Query: 641 gcttctttaatctcatcaagaaagcaaaggaccaaataaatcatctctggatagcagaag 700
||||||| |||||||||||||| ||| ||||||| || |||||| |||||| |||||||
Sbjct: 3149 gcttcttcaatctcatcaagaaggcagaggaccagatgaatcatgtctggactgcagaag 3208
Query: 701 caacagaaaattcgacttattctttcagttttgattccccaatttgttctcaccttaaaa 760
||||||||||||| ||||| || || | ||||||||| ||| |||||||||| ||| ||
Sbjct: 3209 caacagaaaattcaacttactcattgaattttgattcttcaaattgttctcacattagaa 3268
Query: 761 ttgctgctgcttctgctcaaagctggg 787
||||||||| || ||||||||||||
Sbjct: 3269 gtgctgctgccactactcaaagctggg 3295