Jatropha Genome Database

JcCB0052451.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0052451.10 + phase: 1 /partial/short
         (140 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29583.m000188 Iron-sulfur assembly protein IscA, chloroplast pre...   186   2e-47

>29583.m000188 Iron-sulfur assembly protein IscA, chloroplast
           precursor, putative
          Length = 537

 Score =  186 bits (94), Expect = 2e-47
 Identities = 127/138 (92%)
 Strand = Plus / Plus

                                                                       
Query: 3   tgtgacccaaagagccttctcttcctatttgggatgcaattggattatagtgatgctcta 62
           ||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||  ||
Sbjct: 397 tgtgatccaaagagcctcctcttcgtatttgggatgcaattggattatagtgatgcctta 456

                                                                       
Query: 63  attgggggaggtttctcttttaagaacccaaatgctacacaaacgtgtggttgtggtaaa 122
           ||||| |||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 457 attggtggaggtttctcttttaagaacccaaatgctacacaaacatgtggctgcggtaaa 516

                             
Query: 123 tcatttgcagcagagatg 140
           || ||||| |||||||||
Sbjct: 517 tcctttgctgcagagatg 534