Jatropha Genome Database

JcCB0050421.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0050421.10 - phase: 0 /partial
         (372 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30040.m000266 conserved hypothetical protein                          373   e-103

>30040.m000266 conserved hypothetical protein
          Length = 798

 Score =  373 bits (188), Expect = e-103
 Identities = 326/372 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcatggataaacatacgcaaattactactgttctcagctatttttcgactcattttg 60
           ||||| |||||||||||  | ||||| || || |||||||| || ||| |||| ||||||
Sbjct: 1   atggcgtggataaacatgagtaaattgctcctattctcagcaatctttagactaattttg 60

                                                                       
Query: 61  ataatttatggagaatggcaagattcccatatggaggttagatacacagatgtggactac 120
           || |||||||| |||||||||||| ||||||||||||||||||| ||||||||||| |||
Sbjct: 61  attatttatggggaatggcaagatgcccatatggaggttagatatacagatgtggattac 120

                                                                       
Query: 121 cttgtcttctctgatgctgcctcattaatggcttctggagaatccccttacaagagaagt 180
           ||||| |||||||||||||||||  ||||||||||||||||||| |||||||||||||||
Sbjct: 121 cttgttttctctgatgctgcctctctaatggcttctggagaatcgccttacaagagaagt 180

                                                                       
Query: 181 acttacagatattcgcctttgcttgcttttctgcttatacccaattctcttattcatcgc 240
           |||||  | ||||| ||||||||||||||| ||||||||||||| ||  |||||||| | 
Sbjct: 181 acttatcggtattctcctttgcttgcttttttgcttatacccaactcgattattcataga 240

                                                                       
Query: 241 tcatggggtaaattcctcttttctgcttcagatttacttgtgggcttgtttatccacagt 300
           |||||||| |||||  |||| |||||||||||||||||||| ||||||||||||||||  
Sbjct: 241 tcatgggggaaatttatcttctctgcttcagatttacttgtaggcttgtttatccacaaa 300

                                                                       
Query: 301 attttaaagcgacgcaaggtgcctgaggatctatgcttgtattctgtaatggtatggctc 360
           ||||| ||||| || | ||| ||||||||| || || | |||||||||||||||||||||
Sbjct: 301 attttgaagcggcgtagggtacctgaggatttaagcatatattctgtaatggtatggctc 360

                       
Query: 361 ctcaatccattt 372
           ||||||||||||
Sbjct: 361 ctcaatccattt 372