Jatropha Genome Database
- JcCB0049951.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0049951.20 - phase: 1 /pseudo/partial
(1412 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29726.m003902 Amine oxidase [copper-containing] precursor, putative 533 e-151
29726.m003899 Amine oxidase [copper-containing] precursor, putative 64 2e-09
29726.m003897 Amine oxidase [copper-containing] precursor, putative 58 2e-07
>29726.m003902 Amine oxidase [copper-containing] precursor, putative
Length = 2070
Score = 533 bits (269), Expect = e-151
Identities = 647/773 (83%)
Strand = Plus / Plus
Query: 564 gaggttagaccagaagttagcctggtagtaagaatggtgtcaacagtgggcaactatgac 623
|||||||| ||||| | |||||||| ||||| ||||||||||| || ||||||||||||
Sbjct: 1201 gaggttaggccagagataagcctggtggtaaggatggtgtcaactgttggcaactatgac 1260
Query: 624 tatattaatgattgggaatttaagcagagtggttcaatcaaagtcacggttggactaact 683
|| |||||||||||||||||| ||||||||||||||||||||| || ||||| || |||
Sbjct: 1261 tacattaatgattgggaatttctgcagagtggttcaatcaaagttacagttgggctgact 1320
Query: 684 ggtttgttagaagtgagaggatcgatatacacacacaaagaccaaataaaggaggaagta 743
||||| ||| ||||||||| | |||| ||||||| ||||||||| | ||||||||
Sbjct: 1321 ggtttactaggtgtgagaggaacagcatacgcacacaaggaccaaatacacgaggaagtt 1380
Query: 744 tatggtacactactagcagaaaacacaatgggcgttaatcatgatcacttccttacctac 803
||||||||| || ||||||||||||||||||| | |||||||||||||| | || |||
Sbjct: 1381 tatggtacattattagcagaaaacacaatgggtgcacatcatgatcacttcgtcacttac 1440
Query: 804 catcttgatcttgatgtggatggagcttcaaactcatttatcaaatccaagatgcaaatg 863
|| |||||||||||||||||||| | | |||| |||||| |||| |||||| |||||| |
Sbjct: 1441 caccttgatcttgatgtggatggggatgcaaattcatttgtcaagtccaagctgcaaaag 1500
Query: 864 acaccaattactcataatctctctcccagaaagagctactggaaagttattagtgaagtg 923
|||| | | | || | || || || ||||| ||||||| |||| ||||||||
Sbjct: 1501 acacgagtggccaatgacaagtcacctaggaagagttactggagagttgttagtgaaaca 1560
Query: 924 gctaaaactgaatctgatgcaaggattaagcttggtttggaagaagctgatttattagtg 983
|||||||| |||||||| |||| ||||||||| |||||||| |||||||||||||||||
Sbjct: 1561 gctaaaacagaatctgacgcaaagattaagctcggtttggagcaagctgatttattagtg 1620
Query: 984 gttaatcccaataaaaagaccaaaatgggaaacttgattggttaccgtttgatccctgga 1043
|| |||||||| |||| ||| || ||||| ||||| |||||||||||| |||||||||||
Sbjct: 1621 gtcaatcccaacaaaaggactaatatgggcaacttcattggttaccgtctgatccctgga 1680
Query: 1044 tcagccacaagtcctctcttatcagaagatgattatacacaaattaggggagcttttacc 1103
|||| || |||||||||||||||| |||||||| | ||||| | ||||| || |||
Sbjct: 1681 tcagtagcaggtcctctcttatcagaggatgattacccgcaaatccgaggagcattcacc 1740
Query: 1104 aagtataatgtgtgggttacaccatataacaagtctgaaaagtgggcagggggactatat 1163
| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 1741 gaatataatgtgtgggttacaccatataacaagtctgaaaagtgggcaagtggactatat 1800
Query: 1164 gcagatcagagcagaggagatgatactcttgctatatggagtctcaggaacagagtgata 1223
| |||||||| ||||| ||||||||| | |||| ||||| |||||| | || ||||
Sbjct: 1801 gttgatcagagtagaggggatgatactttagctacatggaccctcagggataggaagata 1860
Query: 1224 gaaaataaggacattgtgttatggtatacagttggttttcaccacataccatatcaagaa 1283
|||||||||||||||||| | ||||| ||| | |||||||| || ||||||||||||||
Sbjct: 1861 gaaaataaggacattgtgctgtggtacacattgggttttcatcatgtaccatatcaagaa 1920
Query: 1284 gattttccattaatgccaacattaagcagcggatttgaactacgcccagctaa 1336
||||||||| | ||||| ||||||||||| |||||||| || || ||||||||
Sbjct: 1921 gattttccagtcatgccgacattaagcagtggatttgagctccggccagctaa 1973
Score = 188 bits (95), Expect = 6e-47
Identities = 266/323 (82%)
Strand = Plus / Plus
Query: 22 caagtttatgatggttatggctaccctctgctcacttttgaagaacaaatagctgctaat 81
||||||||||||||||||||||||||| | |||||||| ||||| | | ||||| ||
Sbjct: 367 caagtttatgatggttatggctaccctatactcactttggaagagcttaatgctgcgcat 426
Query: 82 aaattgccgcttcaatacgcaccgtttctggagtccattaacaagagagggcttagtatt 141
| ||||||||| |||||||||||||||||||||| | |||| ||||| || | ||
Sbjct: 427 agcttgccgcttgtatacgcaccgtttctggagtccgtcaacagaagaggtctcaaaata 486
Query: 142 gaagaggtggtttgtgggagttttacaataggttggtatggagatcttaagaggtccaaa 201
|||| ||||| ||||| ||| ||| ||||||||||||||||| |||| | | |||
Sbjct: 487 aaagaagtggtgtgtggaagtcttagtataggttggtatggagaagttaaaatgaagaaa 546
Query: 202 aggactgttaaggttatgtgttactatttaaacgggactgttaatttgtatatgaggcca 261
|||||||||||||| | ||||||||||||| | || |||||||||||||||||||| |||
Sbjct: 547 aggactgttaaggtgacgtgttactatttagatggtactgttaatttgtatatgagacca 606
Query: 262 gttgaaggtgttactttgacggttgatcttgaagaaatgaagataatagacttcaaagac 321
|| || ||||||||| |||| |||||||||||||| |||||||| |||| || || ||
Sbjct: 607 gtcgagggtgttactatgactgttgatcttgaagatatgaagatcataggttttaacgat 666
Query: 322 agattaacgattccaatgccaaa 344
||||||||| | || ||||||||
Sbjct: 667 agattaacggtgccgatgccaaa 689
>29726.m003899 Amine oxidase [copper-containing] precursor, putative
Length = 1920
Score = 63.9 bits (32), Expect = 2e-09
Identities = 74/88 (84%)
Strand = Plus / Plus
Query: 1071 gatgattatacacaaattaggggagcttttaccaagtataatgtgtgggttacaccatat 1130
||||| ||| |||||||| | ||||| || || || |||||||||||| |||| ||||||
Sbjct: 1597 gatgactatccacaaattcgcggagcattcactaaatataatgtgtggattaccccatat 1656
Query: 1131 aacaagtctgaaaagtgggcagggggac 1158
||||||||||| | |||||||| ||||
Sbjct: 1657 aacaagtctgagatatgggcaggtggac 1684
>29726.m003897 Amine oxidase [copper-containing] precursor, putative
Length = 2001
Score = 58.0 bits (29), Expect = 2e-07
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 1074 gattatacacaaattaggggagcttttaccaagtataatgtgtgggttacaccatataac 1133
|||||| ||||||| | ||||| || || || |||||||||||| |||| |||||||||
Sbjct: 1687 gattatccacaaatccgcggagcattcactaaatataatgtgtggattaccccatataac 1746
Query: 1134 aagtctgaaaagtgggcagggggac 1158
||||| |||| |||||||| ||||
Sbjct: 1747 aagtcagaaatatgggcaggtggac 1771