Jatropha Genome Database

JcCB0049771.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0049771.10 - phase: 0 
         (609 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29506.m000171 EXECUTER1 protein, chloroplast precursor, putative      248   3e-65

>29506.m000171 EXECUTER1 protein, chloroplast precursor, putative
          Length = 2028

 Score =  248 bits (125), Expect = 3e-65
 Identities = 224/257 (87%)
 Strand = Plus / Plus

                                                                       
Query: 346 tgggattgggaacgatggagaaggcatttcgaagaagttgatgagcaggagcgtattgtc 405
           ||||||||||| |||||||||| |||||| || ||||||||||| || ||||| || |||
Sbjct: 313 tgggattgggatcgatggagaaagcattttgatgaagttgatgaccaagagcgaatcgtc 372

                                                                       
Query: 406 tctgttttgaagtcacagttaaatcatgctgttaatagggaggattatgaggctgcggct 465
            | ||| | ||||||||||||  ||||||||| ||||| ||||||||||||| |||||||
Sbjct: 373 accgttctaaagtcacagttaggtcatgctgtgaatagagaggattatgaggatgcggct 432

                                                                       
Query: 466 aggctcaaggtggcaattgcagctgctgctacaaatgattctgttggcacagtgatgtca 525
           |||||||||||||||||||||||||| ||||||||||||   ||||||| ||||||||||
Sbjct: 433 aggctcaaggtggcaattgcagctgcagctacaaatgatgtggttggcagagtgatgtca 492

                                                                       
Query: 526 cagctgaatagagcagtgacagaagaacattataaggatgcagctttcttacgagataat 585
           |||||||||||||| ||  ||||||| | |||  ||||||||||| | || |||||||||
Sbjct: 493 cagctgaatagagcggtagcagaagagcgttaccaggatgcagctctgttgcgagataat 552

                            
Query: 586 gctggtgctggtttggt 602
           ||||||||||| |||||
Sbjct: 553 gctggtgctggattggt 569