Jatropha Genome Database
- JcCB0049611.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0049611.10 + phase: 0 /pseudo/partial
(1074 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30147.m013797 Ubiquinone biosynthesis protein coq-8, putative 1094 0.0
>30147.m013797 Ubiquinone biosynthesis protein coq-8, putative
Length = 1512
Score = 1094 bits (552), Expect = 0.0
Identities = 800/885 (90%)
Strand = Plus / Plus
Query: 120 gctgatgatgacagacattcggaatttacaagcatttgctttgtacatgcaaaagacaga 179
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 519 gctgatgatgacagacattcggaatttacaagcatttgctttatacatgcaaaacacaga 578
Query: 180 tatcaaatttgatctatactctgtgaccaaagaaatggagaaacagattggatatgaatt 239
||| || ||||| || ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 579 tataaagtttgacctgtactctgtgactaaagaaatggagaaacagattggatatgaatt 638
Query: 240 tgacttcataagggaggctaatgctatggaaagaatacggcgttttctgtatgagaataa 299
||||||| | |||||||||||||||||||||||||| || | ||||||||||||||||||
Sbjct: 639 tgacttcgtgagggaggctaatgctatggaaagaatccgtcattttctgtatgagaataa 698
Query: 300 caaaagaactcctgttgtggtgccacgagtgttgaaggatatggtcaccaggagggtctt 359
||| | || ||| ||| |||||||||||| ||||| ||||||| |||||||| || ||
Sbjct: 699 caagaaaagtccggtttcagtgccacgagtgctgaagaatatggttaccaggagagtttt 758
Query: 360 gatgatggaatacattgatggaatcccaatccttaaccttggtaatgaaatagccaaaag 419
| ||||||||||| |||||||||||||||| || || |||||| ||||||||||||||||
Sbjct: 759 ggtgatggaatacgttgatggaatcccaattctgaatcttggtgatgaaatagccaaaag 818
Query: 420 aggaatagatcctcgtggtaaggttgcagcagcagcaaagcagaacatacttaaaagtct 479
||||||| ||||| |||||||| ||||| || ||||||||||||||||||||||||||||
Sbjct: 819 aggaataaatcctggtggtaagattgcaacaacagcaaagcagaacatacttaaaagtct 878
Query: 480 gacactagcatatgggcaaatgatactgaagagtggtttcttccatgcagatcctcatcc 539
||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||| ||
Sbjct: 879 gacactagcatatggacaaatgatattgaagagcggtttcttccatgcagatcctcaccc 938
Query: 540 aggaaatatcttaatctgcaaaggttcagaggcaagtcggcatgttgcattgctagatta 599
|||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 939 aggaaatatcttaatctgcaaaggttcagaggcaagtcatcaggttgcgttgctagatta 998
Query: 600 tgggcaagtgaaggatctcccagattcattgaggcttggatatgctaatttggtacttgc 659
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 999 tggacaagtgaaggatctcccagattcattgaggcttgggtatgctaatttggtagttgc 1058
Query: 660 tatggctgataatgaccctataaaagcatcagagagttacagagagcttggcataggtac 719
|||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 1059 tatggctgataatgaccccataaaagcatcagagagctacagagagctcggcataggtac 1118
Query: 720 attgagcagctgtgagaatgaactgcaggaattgcttaagttggcacaaacgatgttcga 779
| |||| |||||||||||| ||||||||||||| ||| |||||||||| ||||| ||
Sbjct: 1119 tctcagcaaatgtgagaatgaattgcaggaattgctgaagctggcacaaactatgtttga 1178
Query: 780 tactaaactaccccctggtgtagtgatgttgcagcctttctcagaggactcttcaatcnn 839
|||||||||||||||||| |||||||| |||||||||||| ||||||||||||| ||
Sbjct: 1179 tactaaactaccccctggagtagtgatcttgcagcctttcacagaggactcttccattaa 1238
Query: 840 nnnnnttgctgttgaggctttcccagaggagctattttctgttcttcggacggtgcatct 899
||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||
Sbjct: 1239 aaagattgctgttgaggctttcccggaggaactattttctgttcttcgtacagtgcatct 1298
Query: 900 cttacgaggtcttagtgttggtctgggaatcaattactcatgtgcagaacaatggagacc 959
|| |||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 1299 tttgagaggtcttagtgttggccttggaatcaattactcatgtgcagaacagtggagacc 1358
Query: 960 cattgcagaagaggcattgtatctagctggcagattaaaaggtgg 1004
|||||||||||| ||||| ||| |||||||||||||||||||||
Sbjct: 1359 cattgcagaagaagcattatatgaagctggcagattaaaaggtgg 1403
Score = 117 bits (59), Expect = 1e-25
Identities = 78/83 (93%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 14 ggggaaatgttttgaaagttttgatgtagaacctcttggttctgcttcaattgcacaggt 73
|||||||||||| ||||| ||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 391 ggggaaatgttt-gaaagatttgatgcagatcctcttggttctgcttcaattgcacaggt 449
Query: 74 ccatcgagcaagattgaaaggtg 96
||||||||||||||||||||||
Sbjct: 450 tcatcgagcaagattgaaaggtg 472