Jatropha Genome Database
- JcCB0049461.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0049461.10 - phase: 0 /partial
(630 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29827.m002590 conserved hypothetical protein 664 0.0
29696.m000106 actin binding protein, putative 88 7e-17
29848.m004543 DNA binding protein, putative 60 2e-08
>29827.m002590 conserved hypothetical protein
Length = 696
Score = 664 bits (335), Expect = 0.0
Identities = 470/515 (91%)
Strand = Plus / Plus
Query: 74 tgcgtagagcatataattgtgaaataatgctcacaaaaataaaagtgcctttgccagaaa 133
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 152 tgcgtagagcatataattgtgaaataatgctcacaaaaataaaagtacctttgccagaaa 211
Query: 134 tgattaatgcagttctagctttggattcttcatctttagacattgaccaggttgagaatc 193
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct: 212 tgattaatgcagttctagctttggattcttcagctttagacattgatcaggttgagaatc 271
Query: 194 tcatcaaattttgtccgactaaggaagaaatggagacgctgaagaattacacaggtgaca 253
|||||||||| ||||| |||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 272 tcatcaaattctgtcccactaaggaagaaatggagacattgaagaattatacaggtgaca 331
Query: 254 aggaaatgctggggaagtgcgaacagtttttcctagagttgatgaaggttccacgagtag 313
|||||||| |||||||||| ||||||||||| || ||| ||||||| ||||| |||||||
Sbjct: 332 aggaaatgttggggaagtgtgaacagttttttctggagctgatgaaagttccgcgagtag 391
Query: 314 aagctaagctccgagtatttgccttcagaatcaccttttctactcaggtggatgatttaa 373
|||||||||| ||||| |||||||| ||||| || ||||||| ||||||||||||| |||
Sbjct: 392 aagctaagcttcgagtgtttgcctttagaataacattttctagtcaggtggatgatctaa 451
Query: 374 gatgtaatctcaatactattaacaatgctgctagagaggtcaaagaatctgcaaaattgc 433
||||||| ||||| |||||||| ||||| |||||||||| |||||||| | ||||||||
Sbjct: 452 gatgtaacctcaaaactattaatgatgctactagagaggtaaaagaatcagtaaaattgc 511
Query: 434 gtcagataatgcaaacaattctgactttaggaaatgctttgaatcagggcactgcaagag 493
|||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct: 512 gtcagataatgcaaacaattctgactttaggaaatgctttgaatcaaggcacagccagag 571
Query: 494 gatctgctgttggattcaaattggatagtcttcttaagttatctgatactcgggctagaa 553
||||||||||||| || ||||| || ||||||||||||||||| || ||||| || ||||
Sbjct: 572 gatctgctgttggttttaaattagacagtcttcttaagttatccgacactcgtgcaagaa 631
Query: 554 acaataaaatgacattaatgcactatttatgcaag 588
|||| |||||||| |||||||| ||| ||||||||
Sbjct: 632 acaacaaaatgactttaatgcattatctatgcaag 666
>29696.m000106 actin binding protein, putative
Length = 3576
Score = 87.7 bits (44), Expect = 7e-17
Identities = 98/116 (84%)
Strand = Plus / Plus
Query: 442 atgcaaacaattctgactttaggaaatgctttgaatcagggcactgcaagaggatctgct 501
||||| ||||||||| || ||||||||||| |||| ||||| ||||| || || ||||||
Sbjct: 2929 atgcagacaattctgtctctaggaaatgctctgaaccagggaactgccaggggctctgct 2988
Query: 502 gttggattcaaattggatagtcttcttaagttatctgatactcgggctagaaacaa 557
||||||| | ||||||||||||||||||||| |||| || ||||| || |||||
Sbjct: 2989 attggatttaggttggatagtcttcttaagttaactgacacacgggcaaggaacaa 3044
>29848.m004543 DNA binding protein, putative
Length = 3801
Score = 60.0 bits (30), Expect = 2e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 265 gggaagtgcgaacagtttttcctagagttgatgaaggttccacgagtaga 314
|||||||| |||||||||||| |||| |||||||| || |||||||||||
Sbjct: 2965 gggaagtgtgaacagtttttcttagaattgatgaaagtaccacgagtaga 3014
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 466 aatgctttgaatcagggcactgcaagaggatctgctgttggattcaaattggatagtct 524
||||||||||| || || ||||||||||| ||||| |||||||| ||||||||||||
Sbjct: 3166 aatgctttgaaccatggaactgcaagaggttctgcagttggatttcgattggatagtct 3224