Jatropha Genome Database

JcCB0047491.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0047491.10 + phase: 0 /partial
         (459 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29633.m000915 t21p5.16 protein, putative                              402   e-112

>29633.m000915 t21p5.16 protein, putative
          Length = 564

 Score =  402 bits (203), Expect = e-112
 Identities = 395/459 (86%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttaagggagcatttggagaaagctgggtgtggagttgaggaaaatttgatcaaggccatt 60
           |||||||||||||| |||||||| ||||||||| | |  || || || || |||||  ||
Sbjct: 103 ttaagggagcatttagagaaagcagggtgtggaataggtgacaactttattaaggctgtt 162

                                                                       
Query: 61  aattgtgattcaaaaatcagtggtggttatatttccggcaaagggataatagtgtgtagc 120
           ||||||||    || || |||||||||||| ||  |||| | |||||| | |||||||||
Sbjct: 163 aattgtgaaaagaagatgagtggtggttatgttagcggcgatgggatagtggtgtgtagc 222

                                                                       
Query: 121 aatcatatgaacattcaagatgaggtcaaccaagtggttatacatgaactgattcacgct 180
           |||||||||||||| |||||||||||||| ||||||||||||||||| || ||||| |||
Sbjct: 223 aatcatatgaacatgcaagatgaggtcaatcaagtggttatacatgagcttattcatgct 282

                                                                       
Query: 181 tatgatgattgtcgtgctaaaaacttggactgggctaattgtgctcatcatgcctgtagt 240
           |||||||| |||||||||  ||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 283 tatgatgactgtcgtgctgcaaacttggactgggctaattgtgttcatcatgcatgtagt 342

                                                                       
Query: 241 gagattcgtgctagtcatttaagcggtgattgccactataaaagggaactgctgcggggt 300
           |||||||||||| | |||||||| || || ||||| ||||| |||||| |||| || |||
Sbjct: 343 gagattcgtgctggccatttaagtggagactgccattataagagggaattgcttcgaggt 402

                                                                       
Query: 301 tacatgaaaatgagaggtcatggacaagaatgcgtgaaaagaagagcaatgaaatcagtg 360
           || |||||||| |||||||||| ||||||||| |||| ||||||||  ||||| ||| ||
Sbjct: 403 tatatgaaaataagaggtcatgaacaagaatgtgtgagaagaagagtgatgaagtcaatg 462

                                                                       
Query: 361 attgctaacccatactgctctgaagctgctgcaaaggatgctgtggaagctgtctgggat 420
           |||||||| ||||||||||| ||||| ||||||||||| ||  |||||||||||||||||
Sbjct: 463 attgctaatccatactgctcagaagcagctgcaaaggacgcaatggaagctgtctgggat 522

                                                  
Query: 421 gtctgttataatgatacgaagccatttgatagagctcct 459
           |||||||| |||||||| ||||| ||||| |||||||||
Sbjct: 523 gtctgttacaatgatacaaagccctttgacagagctcct 561