Jatropha Genome Database
- JcCB0045901.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0045901.20 - phase: 2 /partial
(628 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30204.m001816 Phytochrome-interacting factor, putative 551 e-156
>30204.m001816 Phytochrome-interacting factor, putative
Length = 1719
Score = 551 bits (278), Expect = e-156
Identities = 518/595 (87%), Gaps = 11/595 (1%)
Strand = Plus / Plus
Query: 1 gataaatgaaaagatgagggctttaca-gagctttatacctcgatgcaacaagtcagaca 59
|||||||||||||||||||||||| || ||||| |||||||||||||||||||| || |
Sbjct: 1125 gataaatgaaaagatgagggctttgcaagagctc-atacctcgatgcaacaagtcggata 1183
Query: 60 aagcttctatgttggatgaggcaattgaatacttgaaatcacttcagttgcaagtacaga 119
||||||||||||| |||||||||||||| ||| ||||||| |||||||| ||||||||||
Sbjct: 1184 aagcttctatgttagatgaggcaattgagtacctgaaatcgcttcagttacaagtacaga 1243
Query: 120 tgatgtccatgggatgcagcatggtcccgatgatgttctcaggcatccagcagtatatgc 179
||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 1244 tgatgtccatgggatgcagcatggtcccgatgatgtttcctggcatccagcagtatatgc 1303
Query: 180 caccattggggatgggaatgggaatgggcatgggcatggacttgggcatgaatcggccta 239
||||| ||||||||||||||||||| || ||||||||||| |||| |||| ||| ||||
Sbjct: 1304 caccaatggggatgggaatgggaatcgggatgggcatggaaatgggtatgagtcgaccta 1363
Query: 240 tgatgccattccccaatgtgctagccggtgcacccttgccaacac---caactgcagctg 296
|||||||||| |||||||| ||| | ||||||||| | || |||| | | ||||| |
Sbjct: 1364 tgatgccatttcccaatgttctatctggtgcacccctccccacacaggctgcagcagcag 1423
Query: 297 ctcatttgggtccaaggttccctatgccagcttttcatatgcctcctgtccctaccccag 356
||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |
Sbjct: 1424 ctcatttgggtccaaggttccatatgccagcttttcatatgccccctgtccct------g 1477
Query: 357 gccctgatccatccagaattcaagcagccaaccagtcagatcccatgctaagtgctataa 416
|||||||||||||||||| |||||||||| |||||||||||||||| ||||||| ||||
Sbjct: 1478 cccctgatccatccagaatacaagcagccagccagtcagatcccatggtaagtgcaataa 1537
Query: 417 gcgcacagacttcgcaccaaccaggagtcccaagttttgctgatccttatcagcaatacc 476
|| |||||| | || |||||||| || | |||| ||| | |||||||||||||| || |
Sbjct: 1538 gcacacagaatccgaaccaaccacgattgccaaatttcgtcgatccttatcagcagtatc 1597
Query: 477 ttggtctccagcagatgcaaatgccagtttcacagaaccaagtaatgacccggccaagta 536
|||||||||| ||| |||| || ||||| | ||||||||| |||| ||| ||||||||
Sbjct: 1598 ttggtctccaacagttgcagataccagtaccggagaaccaagcaatggcccagccaagta 1657
Query: 537 caagcaagccaggtaccaatcaaggacctgagaatgttgataatcaccagtcagg 591
| |||||||||||| ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 1658 ccagcaagccaggtgccaatcaaggagctgagaatcttgataatcaccagtcagg 1712