Jatropha Genome Database

JcCB0045481.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0045481.10 + phase: 0 
         (459 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

46032.m000014 transcription factor, putative                           76   2e-13

>46032.m000014 transcription factor, putative
          Length = 495

 Score = 75.8 bits (38), Expect = 2e-13
 Identities = 92/110 (83%)
 Strand = Plus / Plus

                                                                       
Query: 103 gaaatccgtagacggagccgtagaataaagattgctgcttattcatcaatggctcgtgca 162
           |||||||||||| | || | |||||||||||||||| |||||||||| ||||| ||||| 
Sbjct: 145 gaaatccgtagaagaagtcatagaataaagattgcttcttattcatccatggcccgtgcc 204

                                                             
Query: 163 gttggatcgagaagagcttggagtcgagcttttcttttgaaggtaagaaa 212
           || || |||||||| | ||||||  ||||  ||||| ||||| |||||||
Sbjct: 205 gtcgggtcgagaagggtttggagcagagcacttcttctgaagctaagaaa 254



 Score = 54.0 bits (27), Expect = 7e-07
 Identities = 96/119 (80%)
 Strand = Plus / Plus

                                                                       
Query: 324 gcttcgaaagcttgttcctggtggggcggccatggatatttgtgggttattggaggaaac 383
           |||||| | ||||||||||||||| |   |||||||| ||||   |||| ||||||||||
Sbjct: 363 gcttcggacgcttgttcctggtggtgaaaccatggatttttgcaagttactggaggaaac 422

                                                                      
Query: 384 tgcacattacatggaatgtcttcaaactcaggttgaagtgatgcaaaatattgtggatc 442
           ||||   || ||| ||||||||   ||||||||| |||| ||||||| ||| |||||||
Sbjct: 423 tgcaagctatatgaaatgtcttgctactcaggttaaagttatgcaaagtatagtggatc 481