Jatropha Genome Database

JcCB0045441.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0045441.20 - phase: 2 /pseudo/partial
         (304 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29930.m000605 Multidrug resistance protein mdtG, putative              76   1e-13

>29930.m000605 Multidrug resistance protein mdtG, putative
          Length = 1153

 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                       
Query: 227 ttaggattgtcaacagtgagtacggcatggggtataggattgatcattggtccagctcta 286
           |||||||| |||||| | || ||  |||||||||||||| |||||||||| ||||| |||
Sbjct: 490 ttaggattatcaacaataagcacatcatggggtataggactgatcattggcccagcccta 549

                         
Query: 287 ggaggtttccttgc 300
           ||||||||||||||
Sbjct: 550 ggaggtttccttgc 563



 Score = 60.0 bits (30), Expect = 8e-09
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                       
Query: 30  gttatcttcaacaccctctttggccttagcacaaatttttggatggctatcgctacaagg 89
           ||||| |||||||| || || ||||||||   ||| |||||||||||| |  ||||||||
Sbjct: 349 gttattttcaacactctgttcggccttagtgtaaacttttggatggctgttactacaagg 408

                                                 
Query: 90  ttttttcttgggagtttcaacggtttacttggacctat 127
           ||| |||| ||||| || || ||||| |||||||||||
Sbjct: 409 tttcttctggggagcttgaatggtttgcttggacctat 446