Jatropha Genome Database

JcCB0044821.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0044821.10 + phase: 0 
         (666 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014311 Dehydration-responsive element-binding protein 1B,...   143   2e-33
30190.m011121 Dehydration-responsive element-binding protein 1B,...    62   5e-09

>30147.m014311 Dehydration-responsive element-binding protein 1B,
           putative
          Length = 675

 Score =  143 bits (72), Expect = 2e-33
 Identities = 150/176 (85%)
 Strand = Plus / Plus

                                                                       
Query: 187 cggagtggaaaatgggtatccgagatccgggagccacgtaaaactactcgtatatggttg 246
           ||||| || |||||||| || |||||||| ||||||||||||||||| ||||||||| | 
Sbjct: 184 cggagcgggaaatgggtgtctgagatccgtgagccacgtaaaactacgcgtatatggcta 243

                                                                       
Query: 247 ggtacgtactctactcctgaaatggcagccgccgcttacgacgtcgctgctttatccctt 306
           ||||||||  ||||||||||||||||||| || || ||||||||||| ||  || |||||
Sbjct: 244 ggtacgtatactactcctgaaatggcagctgctgcgtacgacgtcgcagcactagccctt 303

                                                                   
Query: 307 aaaggtcccgacgcagccctcaactttcctgaatctattttatcttatccaatacc 362
           ||||| || ||| ||||||| || || || ||||||||||| ||||| ||||||||
Sbjct: 304 aaaggcccggacacagccctgaatttcccggaatctattttgtcttacccaatacc 359


>30190.m011121 Dehydration-responsive element-binding protein 1B,
           putative
          Length = 738

 Score = 61.9 bits (31), Expect = 5e-09
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                          
Query: 190 agtggaaaatgggtatccgagatccgggagccacgtaaaactactcg 236
           |||||||||||||| || || ||||| ||||||||||||||||||||
Sbjct: 241 agtggaaaatgggtttcagaaatccgcgagccacgtaaaactactcg 287