Jatropha Genome Database

JcCB0044721.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0044721.10 - phase: 0 
         (915 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30078.m002291 metal ion binding protein, putative                     208   4e-53

>30078.m002291 metal ion binding protein, putative
          Length = 1038

 Score =  208 bits (105), Expect = 4e-53
 Identities = 301/368 (81%), Gaps = 15/368 (4%)
 Strand = Plus / Plus

                                                                       
Query: 4   gacatgcattgcgagggctgtgctaagaaagttagacgtgccgttaaacatttggaaggt 63
           |||||||||||||| |||||||| |||||| ||||| |||| ||||| | ||| ||||| 
Sbjct: 133 gacatgcattgcgaaggctgtgccaagaaatttagaagtgctgttaagcgtttagaaggc 192

                                                                       
Query: 64  gtggaaactgtgaaaacagattgtgagggcaacaaattgacggtgaccgggaaagtagac 123
           |||||| | ||||||||||||||||| || |||||| ||||||| ||||| ||||| |||
Sbjct: 193 gtggaagcggtgaaaacagattgtgaaggtaacaaactgacggtcaccggtaaagtggac 252

                                                                       
Query: 124 ccggagaaagtcaaggcgaggttggaggagaaaacaaagaagaaagtggagattgtgtct 183
           || | |||||| ||||| ||| | ||||||||||| ||||||||||| || ||| | |||
Sbjct: 253 cctgcgaaagttaaggctaggcttgaggagaaaactaagaagaaagttgatattatatct 312

                                                                       
Query: 184 gctccaccgaagaaagacggtggcggtgataagaaacctgaagagaaatcggacaaaaaa 243
            | | ||| ||||||||||| || ||||| || ||||| ||         ||| || || 
Sbjct: 313 ccactacccaagaaagacggcggtggtgaaaaaaaaccgga---------ggagaagaag 363

                                                                       
Query: 244 ccggaggagaaaaagcctgaagagaagaaaccgtctcctcctaaagagagtacggtcgtt 303
           ||||||||||| || |||||||| ||||||      || |||||||||||||||||||||
Sbjct: 364 ccggaggagaagaaacctgaagaaaagaaa------ccacctaaagagagtacggtcgtt 417

                                                                       
Query: 304 ttgaagatcagaacccactgtgatggttgcattacaaaaatgaagaagatcatcttgaaa 363
           ||||| |||||||| || || ||||||||| || |||||||||||||||| ||| |||||
Sbjct: 418 ttgaaaatcagaacacattgcgatggttgcgtttcaaaaatgaagaagattatcgtgaaa 477

                   
Query: 364 atcaaagg 371
           ||||||||
Sbjct: 478 atcaaagg 485



 Score =  111 bits (56), Expect = 7e-24
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                        
Query: 802  gtacaacaaggatatgtacaacaggggtatgtgatggaaccaatgtacaaccatccaatg 861
            ||||| || ||||||||||| || || || || |||||||||||||||||||||||||||
Sbjct: 925  gtacagcagggatatgtacagcaaggatacgttatggaaccaatgtacaaccatccaatg 984

                                            
Query: 862  catgctccgcagatgttcagcgacgagaatcc 893
            |||||||| |||||||||||||| ||||||||
Sbjct: 985  catgctccacagatgttcagcgaggagaatcc 1016



 Score = 81.8 bits (41), Expect = 7e-15
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                       
Query: 629 cacctaagatggaggtgagcaagatggagtactatccagcaccggcaccgactcactggt 688
           ||||||||||||||||||||||| ||||||| | |||||| |||||||||||||| ||||
Sbjct: 752 cacctaagatggaggtgagcaagctggagtattttccagctccggcaccgactcattggt 811

            
Query: 689 t 689
           |
Sbjct: 812 t 812