Jatropha Genome Database

JcCB0044401.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0044401.20 - phase: 0 /partial
         (183 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29693.m001988 conserved hypothetical protein                          105   9e-23

>29693.m001988 conserved hypothetical protein
          Length = 495

 Score =  105 bits (53), Expect = 9e-23
 Identities = 92/105 (87%)
 Strand = Plus / Plus

                                                                       
Query: 66  attgccatctcagctgtgtaggcctagtgcaggtctttccatgaagagatcaatccaaag 125
           ||||||||||| ||||||||| |||||  | ||||| ||||||||||||||||||||| |
Sbjct: 381 attgccatctccgctgtgtagccctagcaccggtctatccatgaagagatcaatccaacg 440

                                                        
Query: 126 gttcctccagaagaggaaccataggattcatgcaacctctcctta 170
            ||||||||||||||||| ||||||  ||| ||||| ||||||||
Sbjct: 441 tttcctccagaagaggaagcatagggctcaggcaacttctcctta 485