Jatropha Genome Database

JcCB0044401.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0044401.10 + phase: 0 /partial/short
         (129 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29693.m001985 (S)-2-hydroxy-acid oxidase, putative                    111   9e-25

>29693.m001985 (S)-2-hydroxy-acid oxidase, putative
          Length = 1110

 Score =  111 bits (56), Expect = 9e-25
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                        
Query: 13   atgcttcgcgaggagtttgagctaacaatggcattaagtggttgccgttcactcagggag 72
            ||||||||||| ||||| ||||||||||||||||||||||| ||||| || |||||||| 
Sbjct: 985  atgcttcgcgatgagttcgagctaacaatggcattaagtggctgccgctcgctcagggaa 1044

                                                            
Query: 73   atcacccgtaaccacatcgtggccgactgggaccttcctcgccctgtt 120
            || |||||| ||||||| ||  | |||||||| |||||||||||||||
Sbjct: 1045 attacccgtgaccacattgtaactgactgggatcttcctcgccctgtt 1092