Jatropha Genome Database
- JcCB0042151.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0042151.20 - phase: 0 /pseudo/partial
(804 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29703.m001518 sugar transporter, putative 678 0.0
30128.m008707 D-xylose-proton symporter, putative 52 5e-06
>29703.m001518 sugar transporter, putative
Length = 1446
Score = 678 bits (342), Expect = 0.0
Identities = 561/634 (88%)
Strand = Plus / Plus
Query: 168 actgctagatttgtttcaaagaagatacctccgctcagttattataggagttggattgat 227
|||||| ||||||||||||||||||||||| || || || | ||||||||| ||| ||||
Sbjct: 807 actgctcgatttgtttcaaagaagatacctgcgatccgtaactataggagtcggactgat 866
Query: 228 ggtctttcagcaatttggaggaatcaacggagtctgcttttataccagcaacatatttga 287
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct: 867 ggtctttcagcaatttggaggaattaacggagtctgcttttataccagcaacattttcga 926
Query: 288 gtcagcagggttttctgccactattgggaccatagcctatgccatcattcaggttgtagt 347
|||||| || |||||||| |||||||| |||||| |||||||||| ||||||||||||||
Sbjct: 927 gtcagcgggattttctgctactattggaaccataacctatgccattattcaggttgtagt 986
Query: 348 tactggccttaacacaaccgtgatagacaaagctggaagaaagcctctattattggtttc 407
||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 987 tacagcccttaacacaaccgtgatagacaaagctggaagaaagcctctcttattggtttc 1046
Query: 408 cgcatcaggactagtcatttcctgcttgataactgggatttcattctatcttaaggatca 467
||| ||||||| |||||| ||||| |||||||||||| ||||||||| | ||| | |
Sbjct: 1047 tgcaacaggactggtcattgcctgcctgataactgggacatcattctatttgaagactaa 1106
Query: 468 tgaaatggcactcacttctgtacccacactcgccgttactggcatactgttgtatatagg 527
||| | || |||| |||| || |||| |||||||||||||||||| | ||||||||
Sbjct: 1107 tgacttagcgctcaaggctgtgcctgcacttgccgttactggcatactgctatatatagg 1166
Query: 528 atcattttcagcagggatgggtgcagttccctgggtagtaatgtcagagatatttcctat 587
||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1167 atccttttcagcaggaatgggtgcagttccctgggttgtaatgtcagagatatttcctat 1226
Query: 588 aaatattaaaggagtagcaggaagcctagcaacactaacgaactggtttggtgcatgggc 647
|||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||| |
Sbjct: 1227 aaatatcaaaggagtagcaggaagcctagcaacgctaatgaactggtttggtgcatggac 1286
Query: 648 aatttcctacacctacaacttccttacgagctggagttcctatggtacctttgttcttta 707
||| ||||| ||||||||||| || | | |||||| ||||||||||||||| || ||||
Sbjct: 1287 aatctcctatacctacaactttctcatgtcctggagctcctatggtacctttattattta 1346
Query: 708 tgctgcaatcaacgcattgggtattgttttcatagcgaaggtggtaccagaaaccaaagg 767
|||||| ||||| ||| ||||||||||||| | || |||||||| ||||||||||||||
Sbjct: 1347 tgctgcgatcaatgcactgggtattgtttttgtggccaaggtggtgccagaaaccaaagg 1406
Query: 768 aagaaccctggaacaaattcaggcagccattaat 801
|||||||||||| || ||||| ||||||||||||
Sbjct: 1407 aagaaccctggagcagattcaagcagccattaat 1440
Score = 105 bits (53), Expect = 4e-22
Identities = 89/101 (88%)
Strand = Plus / Plus
Query: 9 ggacttgtcccctgtggtattctgcttttaggcctatttctcactccagagtcccccaga 68
|||||||| ||||||| ||| || |||| ||||||||||||| ||| || || || |||
Sbjct: 610 ggacttgttccctgtgctatcctaatttttggcctatttctcattcctgaatcaccgaga 669
Query: 69 tggctggcaaagatgggacgtgacaagcagtttgagactgc 109
||||||||||||||||||||||| |||||||||||||||||
Sbjct: 670 tggctggcaaagatgggacgtgaaaagcagtttgagactgc 710
>30128.m008707 D-xylose-proton symporter, putative
Length = 1479
Score = 52.0 bits (26), Expect = 5e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 574 gagatatttcctataaatattaaagg 599
||||||||||||||||||||||||||
Sbjct: 1216 gagatatttcctataaatattaaagg 1241