Jatropha Genome Database

JcCB0042151.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0042151.10 + phase: 0 
         (1707 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29703.m001521 hypothetical protein                                    159   7e-38
29703.m001522 conserved hypothetical protein                           88   2e-16
29703.m001520 conserved hypothetical protein                           58   2e-07

>29703.m001521 hypothetical protein
          Length = 387

 Score =  159 bits (80), Expect = 7e-38
 Identities = 135/152 (88%), Gaps = 1/152 (0%)
 Strand = Plus / Plus

                                                                        
Query: 916  atgaagcagtattatcccaaactcaagtactatgcaggagagataatgattttaggtgga 975
            ||||||||||| ||| |||| ||||||   ||| |||||||| |||||||||||||||||
Sbjct: 1    atgaagcagtactattccaagctcaagccgtatacaggagaggtaatgattttaggtgga 60

                                                                        
Query: 976  gattacttcgcatcagaatgtcctgtgggtattaatttagatattaggcaacctccagag 1035
            |||||||| |||||||||||||||||||||||||| || ||||| | ||||||||| |||
Sbjct: 61   gattactttgcatcagaatgtcctgtgggtattaactttgatatcaagcaacctccggag 120

                                            
Query: 1036 gcaactcgattcgttatgcttccaactgctgc 1067
             |||||||||| |||||||||||||| |||||
Sbjct: 121  acaactcgatt-gttatgcttccaacggctgc 151



 Score = 87.7 bits (44), Expect = 2e-16
 Identities = 113/136 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1148 tagggaagacatatgaggtagttgtgactacttatagaggattatatcgttatcggttgg 1207
            |||| ||| |||| ||||| |||||||  ||||| |||||||| |||||||| || ||||
Sbjct: 170  taggtaaggcatacgaggtggttgtgataacttacagaggattttatcgttaccgcttgg 229

                                                                        
Query: 1208 gcgatattgtgagagttgttggttttcataattcatccccagaagtggagtttgtaatga 1267
            | |||||||||||| ||||  |||| | ||||||||| || |||||||||||| | ||||
Sbjct: 230  gtgatattgtgagaattgtcagtttgcgtaattcatctccggaagtggagtttctgatga 289

                            
Query: 1268 gagctccaaaaactgc 1283
            || |||| | ||||||
Sbjct: 290  gaactcctagaactgc 305


>29703.m001522 conserved hypothetical protein
          Length = 234

 Score = 87.7 bits (44), Expect = 2e-16
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                       
Query: 274 tgtttcttctacagctctggaactagtacaatgaaccccaaattgataccatactttgat 333
           ||||||||||||||||| ||  ||||||||||||| || ||||||||||| || | ||||
Sbjct: 58  tgtttcttctacagctccggcgctagtacaatgaagcctaaattgataccgtattatgat 117

                                                       
Query: 334 tcggctctatcaagggctgcttcctacatagcacaccaaggcag 377
           || ||| ||||||| ||||| ||||| ||||| ||||| |||||
Sbjct: 118 tcagctttatcaagagctgcatcctatatagctcaccagggcag 161


>29703.m001520 conserved hypothetical protein
          Length = 240

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1549 cctggtagctttaatgagatattactagttgcagtggagaatggagcaccagctagtcag 1608
            |||||||||||| |   |||||||| | | || ||||||||||||| |||||||||||| 
Sbjct: 76   cctggtagctttgacaggatattacaaatggctgtggagaatggagtaccagctagtcaa 135

                             
Query: 1609 tataaaccaccaaagat 1625
            |||||||| || |||||
Sbjct: 136  tataaacccccgaagat 152