Jatropha Genome Database
- JcCB0041981.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0041981.10 + phase: 0 /partial
(969 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29773.m000289 methylenetetrahydrofolate dehydrogenase, putative 363 1e-99
29773.m000286 formate-tetrahydrofolate ligase, putative 349 2e-95
29773.m000290 conserved hypothetical protein 311 4e-84
29773.m000288 methylenetetrahydrofolate dehydrogenase, putative 129 3e-29
>29773.m000289 methylenetetrahydrofolate dehydrogenase, putative
Length = 447
Score = 363 bits (183), Expect = 1e-99
Identities = 382/447 (85%), Gaps = 1/447 (0%)
Strand = Plus / Plus
Query: 397 atggacgaattcaatcttcacctaacgggggatatccatgcaataacagctgcaaacaat 456
||||| || ||||| ||||||||||| || ||||| ||||| |||||||||||||| |||
Sbjct: 1 atggatgatttcaaacttcacctaacaggagatattcatgctataacagctgcaaataat 60
Query: 457 ctccttgcagctgctattgatactcgaattttccatgagtcatctcaatctgataaagct 516
|| || ||||||||||||||||| || ||||| |||||||| | ||||| ||||| |||
Sbjct: 61 ctactagcagctgctattgatacccggatttttcatgagtctacacaatcagataaggct 120
Query: 517 cttttcaaccgattatgcctacctaacaaagaaggaaaaagaacctttagtgatataatg 576
||||| |||||| |||||| || || |||||||| | ||||| |||||||| ||||||
Sbjct: 121 cttttgaaccgactatgccctccgaataaagaagggagaagaagttttagtgacataatg 180
Query: 577 tttaggcgtttgaagaagcttggtatctccaagactaaaccagaggaactcactgcacaa 636
||||||||| ||||||| |||||||| || ||||| ||||||||||| || | ||||||
Sbjct: 181 tttaggcgtctgaagaaacttggtatatctaagaccaaaccagaggaccttatagcacaa 240
Query: 637 gaaattaagaagtttgctagacttgatatagatccaaattcaattacatggaggagagtt 696
||| | ||||| ||||| || |||||||| || || ||||||||||||||||||||||
Sbjct: 241 gaagtcaagaaatttgcaaggcttgatattgacccggattcaattacatggaggagagtg 300
Query: 697 atggatgtcaatgaccgattcttgaggaagattactgttggtcaaggtcctgaagaaaag 756
||||||||||||||| | |||||||||||||| || |||| ||||||||||||||||||
Sbjct: 301 atggatgtcaatgacaggttcttgaggaagatcaccattggccaaggtcctgaagaaaag 360
Query: 757 ggaatgctgagagaaacaggatttgatatttctgttgctagtgagataatggcagttctg 816
|| ||| ||||||||||||||||||| ||||| ||||| |||||||||||| ||||| ||
Sbjct: 361 gggatggtgagagaaacaggatttgacatttccgttgcaagtgagataatgacagttttg 420
Query: 817 gcccttactacatctcttgctgatatg 843
|||| | | ||||||||| ||||||||
Sbjct: 421 gccc-tgcaacatctctttctgatatg 446
>29773.m000286 formate-tetrahydrofolate ligase, putative
Length = 1248
Score = 349 bits (176), Expect = 2e-95
Identities = 263/292 (90%)
Strand = Plus / Plus
Query: 15 gaggaagctgcaagtagtgtctcctgtaccagcagatattgacattgctaactcagttga 74
|||||||||| |||| ||||| || |||||||||||||| ||||||||||||||||||||
Sbjct: 24 gaggaagctggaagtggtgtcaccagtaccagcagatatagacattgctaactcagttga 83
Query: 75 gccttttcatatctctgagattgccaaggacctcaatcttagtcccaaccattatgatct 134
|||||||||||| ||| | || || || || || ||||| ||||| ||||||||||||||
Sbjct: 84 gccttttcatatatctcaaatcgctaatgaacttaatctcagtcctaaccattatgatct 143
Query: 135 ctatggaaaatacaaagccaaggtgttattgtctgctcttgatgagcttgaaggatcacc 194
| ||| |||||||| |||||||| |||||||||| ||||||||||||||||||| || |
Sbjct: 144 ttttggcaaatacaaggccaaggtattattgtctgttcttgatgagcttgaaggaacagc 203
Query: 195 agatgggtactatgtggttgttggagggattacgcctacaccacttggggaaggcaaatc 254
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 204 agatgggtactatgtggttgttggagggattacacctacaccacttggggaaggcaagtc 263
Query: 255 aactactacggttgggctttgtcaagctttgggagcatttcttgataaaaag 306
|||||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 264 tactactacagttgggctttgtcaagctttgggtgcttttcttgataaaaag 315
>29773.m000290 conserved hypothetical protein
Length = 225
Score = 311 bits (157), Expect = 4e-84
Identities = 205/221 (92%)
Strand = Plus / Plus
Query: 160 ttattgtctgctcttgatgagcttgaaggatcaccagatgggtactatgtggttgttgga 219
|||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 4 ttattgtctgttcttgatgagcttgaaggaacagcagatgggtactatgtggttgttgga 63
Query: 220 gggattacgcctacaccacttggggaaggcaaatcaactactacggttgggctttgtcaa 279
|||||||| ||||||||||||||||||||||| || |||||||| |||||||||||||||
Sbjct: 64 gggattacacctacaccacttggggaaggcaagtctactactacagttgggctttgtcaa 123
Query: 280 gctttgggagcatttcttgataaaaaggttgtcacctgccttcgccaaccatcacaagga 339
|||||||| || |||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 124 gctttgggtgcttttcttgataaaaaggttgtcacctgccttcgtcagccatcacaaggg 183
Query: 340 cctacttttggaattaaagggggtgcagcaggtggtggtta 380
| || |||||||||||||| ||||||||||||||||||||
Sbjct: 184 tcaacatttggaattaaaggaggtgcagcaggtggtggtta 224
>29773.m000288 methylenetetrahydrofolate dehydrogenase, putative
Length = 1044
Score = 129 bits (65), Expect = 3e-29
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 869 ttggaaatagcaaggctggtgaccctataacagctgatgatcttggtgttggaggtgctt 928
|||||||||||||||||||||| || ||||||||||||||||||||| ||| ||||||||
Sbjct: 8 ttggaaatagcaaggctggtgatccaataacagctgatgatcttggtcttgaaggtgctt 67
Query: 929 tgactgtactaatgaaagatgccatcaatcctactctaatg 969
||||||||||||| || ||||| || ||||||||| |||||
Sbjct: 68 tgactgtactaattaaggatgcaattaatcctactttaatg 108