Jatropha Genome Database

JcCB0041831.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0041831.10 - phase: 0 /partial
         (774 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005289 Protein bem46, putative                                 543   e-154

>29912.m005289 Protein bem46, putative
          Length = 693

 Score =  543 bits (274), Expect = e-154
 Identities = 394/434 (90%)
 Strand = Plus / Plus

                                                                       
Query: 7   ggtccaaccatcttgtttttccaggaaaatgccggaaatattgctcaccgtcttgaaatg 66
           |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 238 ggtccaaccatcttgtttttccaggagaatgcaggaaatattgctcaccgtcttgaaatg 297

                                                                       
Query: 67  gttcgcataatgatacagaggttgcactgcaatgtgttcatgctttcatacagaggttat 126
           ||||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||||
Sbjct: 298 gttcgcataatgatacaaagattgcactgcaatgttttcatgctttcataccgaggttat 357

                                                                       
Query: 127 ggagcaagtgatggatacccttctcaacatggaatcgcaaaggatgctcaggctgcacta 186
           |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| | 
Sbjct: 358 ggagcaagtgatggatacccttctcaacatggcatcacaaaggatgctcaggctgcattg 417

                                                                       
Query: 187 gattatcttactcagaggactgacattgactcgtctagaatagtcgtatttgggaggtca 246
           ||| ||||| |||| ||||||||||||||| | ||||||||||| || |||||||| |||
Sbjct: 418 gatcatctttctcaaaggactgacattgacacatctagaatagttgtgtttgggagatca 477

                                                                       
Query: 247 cttgggggtgcagttggggctctgctgaccaaaaacaatcctgataaggtggctgggttg 306
            | || ||||||||||| |||||||| ||||||| ||||||||||||||| ||||| || 
Sbjct: 478 ttgggcggtgcagttggagctctgctaaccaaaagcaatcctgataaggttgctggatta 537

                                                                       
Query: 307 atactggaaaatacttttacatctattctggatatggctggagttttactgcccttctta 366
           ||||| |||||||||||||| ||||||||||| |||||||||||| ||||||||||||||
Sbjct: 538 atactcgaaaatacttttacgtctattctggacatggctggagttctactgcccttctta 597

                                                                       
Query: 367 aagtggtttattggaagcaatcattcaaaaggtcctaaaattcttaattttcttgtacga 426
           || |||||||||||||| ||||||||||||||||| | ||| ||||| |||||||| || 
Sbjct: 598 aaatggtttattggaagtaatcattcaaaaggtccaagaatccttaactttcttgtgcgt 657

                         
Query: 427 tctccatggagcac 440
           ||||| ||||||||
Sbjct: 658 tctccgtggagcac 671