Jatropha Genome Database

JcCB0041771.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0041771.10 + phase: 0 
         (507 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29610.m000411 Coronatine-insensitive protein, putative                202   1e-51

>29610.m000411 Coronatine-insensitive protein, putative
          Length = 1809

 Score =  202 bits (102), Expect = 1e-51
 Identities = 313/381 (82%), Gaps = 3/381 (0%)
 Strand = Plus / Plus

                                                                       
Query: 105 agaccgcgacgctgtttcactggtttgtcgtcgctggtatgagcttgacgccttaacgcg 164
           |||||||||||| |||||| | || ||||| || ||||| ||| | || || ||||| ||
Sbjct: 114 agaccgcgacgccgtttcattagtatgtcgccgatggtacgagttagatgctttaacacg 173

                                                                       
Query: 165 aaagcatataacgatcgctttatgctataccactagtccggatcggttacgacgtcgttt 224
            |||||||||||||| |||||||| ||||| || ||||| |||||| | || ||||||||
Sbjct: 174 taagcatataacgatagctttatgttatacaacaagtccagatcggcttcgtcgtcgttt 233

                                                                       
Query: 225 taagcaccttgaatccctaaagctgaaagggaaaccaagagctgctatgtttaatttgat 284
           |||||||||||||||  ||||||| ||||||||||| |||||||| ||||||||| | ||
Sbjct: 234 taagcaccttgaatctttaaagcttaaagggaaacctagagctgcgatgtttaatctaat 293

                                                                       
Query: 285 accggaggattggggagggtttgtgacgccgtgggttaatgaaattgc--cgac-tcgtt 341
           ||| || |||||||| || | ||| || || ||| || ||||||||||  || | |||||
Sbjct: 294 acctgaagattggggtggttatgttactccttggattgatgaaattgctgcggcgtcgtt 353

                                                                       
Query: 342 tgattgcttgaaatctgttcacttcagacgaatgattgtgaaggactcggatctggagct 401
           |  ||||||||||||| |||| || | ||| ||||| || || || || ||||| |  ||
Sbjct: 354 tacttgcttgaaatctcttcattttaaacgtatgatcgttaaagattctgatcttgccct 413

                                                                       
Query: 402 tctcgctaagtctcgtggtcgggtcttgcaggtcttgaaacttgataagtgttctggatt 461
           | | ||||||||||||||   ||| || || || ||||||||||||||||||||||| ||
Sbjct: 414 tttagctaagtctcgtggaaaggttttacatgtgttgaaacttgataagtgttctggctt 473

                                
Query: 462 ctctaccgatgggcttttaca 482
           |||||||||||| ||||||||
Sbjct: 474 ctctaccgatggccttttaca 494