Jatropha Genome Database

JcCB0037201.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0037201.10 - phase: 2 /pseudo/partial
         (564 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29092.m000450 C-14 sterol reductase, putative                         291   2e-78

>29092.m000450 C-14 sterol reductase, putative
          Length = 849

 Score =  291 bits (147), Expect = 2e-78
 Identities = 225/251 (89%)
 Strand = Plus / Plus

                                                                       
Query: 310 gctaacaagcaaaagcatgttttcaaaaagaatccaaaagccctcatatggggtaagcca 369
           ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 520 gctaacaagcaaaagcatgttttcaaaaagaatcccaaagctctcatatggggtaagcca 579

                                                                       
Query: 370 ccaagggttgttggtggaaaattgcttgcttctggttattgggggattgcaagacattgt 429
           |||| |||  | || |||||  | |||||||||||||| ||||| |||||||||||||||
Sbjct: 580 ccaatggtaataggaggaaagcttcttgcttctggttactggggcattgcaagacattgt 639

                                                                       
Query: 430 aattatcttggagacctattgttggcgctgtcatttagtctaccttgtgggacaagttcc 489
           ||||||||||||||||| |||||||| ||||| ||||||||||||||||||| |||||||
Sbjct: 640 aattatcttggagacctgttgttggctctgtcctttagtctaccttgtgggataagttcc 699

                                                                       
Query: 490 cttgttccatatttttatccgatttatcttcttattctgctaatatggagagagagaagg 549
           |  |||||||| || || || ||||| |||||||||||||||||||||||||| ||||| 
Sbjct: 700 ccggttccatacttctacccaatttaccttcttattctgctaatatggagagaaagaaga 759

                      
Query: 550 gacgaggctcg 560
           ||||| |||||
Sbjct: 760 gacgaagctcg 770



 Score =  216 bits (109), Expect = 1e-55
 Identities = 154/169 (91%)
 Strand = Plus / Plus

                                                                       
Query: 41  cttgagctgctttcagcaacttttattttcagtgttcttttatacatcctggattacttc 100
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 256 cttgagctgctatcagcaacttttattttcagtgttcttttatacatcctggattacttt 315

                                                                       
Query: 101 ttttatgaggaatacatgacctccacatgggacataatagcagagagattgggcttcatg 160
           || |||||||| || |||||||| ||||||||||| || || ||||||||||||||||||
Sbjct: 316 ttctatgaggagtatatgacctctacatgggacattattgccgagagattgggcttcatg 375

                                                            
Query: 161 ctagtatttggtgatcttgtttggattccattcacgtttagcatccagg 209
            | |||||||||||||| || |||||||| ||||| |||||||||||||
Sbjct: 376 ttggtatttggtgatctggtctggattcctttcacttttagcatccagg 424