Jatropha Genome Database

JcCB0035061.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0035061.10 - phase: 0 /pseudo
         (661 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30148.m001414 conserved hypothetical protein                          432   e-120

>30148.m001414 conserved hypothetical protein
          Length = 918

 Score =  432 bits (218), Expect = e-120
 Identities = 422/490 (86%)
 Strand = Plus / Plus

                                                                       
Query: 80  tccgcccagctgttattcttccaggtttagggaacaacactgcagactatcagaagttgg 139
           ||||||| ||| | ||||||||||||||||| || ||||||| ||| |||||||||||||
Sbjct: 80  tccgccctgctatcattcttccaggtttaggtaataacactggagattatcagaagttgg 139

                                                                       
Query: 140 aagtgacactgaaggaatatggggtgcctacggttgttgctaaggtgtcaagatttgact 199
           |||| |||||||| || ||| | ||||| || ||||| |||||||||||||||||||| |
Sbjct: 140 aagttacactgaatgagtatagagtgccaacagttgtcgctaaggtgtcaagatttgatt 199

                                                                       
Query: 200 ggttcaggaatgccgctggtttggtagaccccaattactggcgtggaactctccaaccta 259
           ||||||| ||||| ||||||||||| |||||||| ||||||||||| |||||||| ||| 
Sbjct: 200 ggttcagaaatgctgctggtttggtggaccccaactactggcgtggcactctccagcctc 259

                                                                       
Query: 260 ggcccgttcttgattggtatatgaagaggattcaagaagcagtcaatgaggcaaaggagt 319
           |||| ||||||||||||||| |||||||| |  | || |||||    |||||||||||| 
Sbjct: 260 ggcctgttcttgattggtatttgaagagggtagatgaggcagttcgggaggcaaaggagc 319

                                                                       
Query: 320 tggcacaaggtggaactttgtccttgatcggccactcggcaggagggtggcttgcacgcg 379
           |||||||||||||||  || ||  | || |||||||| || ||||| ||||||||||| |
Sbjct: 320 tggcacaaggtggaagcttatctctaattggccactcagccggaggatggcttgcacgtg 379

                                                                       
Query: 380 tctacatggaagaattcgggctgtctgatatctctttgctattgacgcttggtacacccc 439
           ||||||||||||||||||||| |||||| ||||| ||||| || || || ||||| ||||
Sbjct: 380 tctacatggaagaattcgggccgtctgacatctccttgctgttaaccctgggtactcccc 439

                                                                       
Query: 440 acttgccacctccaaaaggagtgccgggggttattgatcaaacaaggggtctcctttatt 499
           ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 440 acttgccacctccaaaaggagtgccaggggttattgatcaaacaagaggtctcctttatt 499

                                                                       
Query: 500 atgttgaggaacattgtgcaaaagctgtttataatcctcagttgaaatatgtatgtattg 559
           |||| ||  |||||||     |||||||||| | |||| | |||||||||||||||||||
Sbjct: 500 atgtcgaaaaacattgcaaggaagctgtttacactcctgacttgaaatatgtatgtattg 559

                     
Query: 560 cagggaggta 569
           ||||||||||
Sbjct: 560 cagggaggta 569