Jatropha Genome Database
- JcCB0034881.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0034881.20 + phase: 0 /pseudo
(476 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m010847 dynamin, putative 490 e-138
29742.m001419 dynamin, putative 182 1e-45
27647.m000182 dynamin, putative 100 1e-20
29709.m001211 dynamin, putative 60 1e-08
>30190.m010847 dynamin, putative
Length = 1833
Score = 490 bits (247), Expect = e-138
Identities = 364/403 (90%)
Strand = Plus / Plus
Query: 1 atggagaatttgatttctctggttaataaaatacagagagcttgtacggctctcggtgat 60
|||||||||||||||||| |||| ||||||||||| ||||||||||| ||||||||||||
Sbjct: 1 atggagaatttgatttctttggtaaataaaatacaaagagcttgtactgctctcggtgat 60
Query: 61 catggtgaagcaagcgcattgcctactctctgggactccttgcctgctattgcggtcgtc 120
|| |||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 61 cacggtgaagctagcgcattgcctactctttgggactctttgcctgctattgccgtcgtc 120
Query: 121 ggtggccagagttcaggaaagtcttcagtgttggagagcgttgttgggaaggacttttta 180
||||||||||||||||| || || |||||||| |||||| | || || ||||||||||||
Sbjct: 121 ggtggccagagttcagggaaatcatcagtgttagagagcatcgtcggaaaggacttttta 180
Query: 181 cctcgtggatctggaattgttacacgacggcctcttgtgttgcagcttcacaagagtgat 240
||||| ||||| || |||||||| || || ||||||||||| |||||||| |||||||||
Sbjct: 181 cctcgaggatccgggattgttactcggcgtcctcttgtgttacagcttcataagagtgat 240
Query: 241 gaaggtagcagagaatatgcagagttccttcacctcccaaggaaaaggttcaccgatttt 300
||||||||||||||||| || ||||||||||||||||| ||||||| ||||||||||||
Sbjct: 241 gaaggtagcagagaatacgcggagttccttcacctccctcggaaaagattcaccgatttt 300
Query: 301 gctgctgtgcggaaagagattcaggatgagactgatcgagagactgggcgcacaaaacaa 360
||||||||||| || |||||||| || |||||||||||||||||||| || ||||||||
Sbjct: 301 gctgctgtgcgcaaggagattcaagacgagactgatcgagagactggccgtgcaaaacaa 360
Query: 361 atctctagtgttccaattcatttgagtatatactctcccaatg 403
|||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 361 atctctagtgttccaattcatttgagtatatattctcctaatg 403
>29742.m001419 dynamin, putative
Length = 1830
Score = 182 bits (92), Expect = 1e-45
Identities = 309/378 (81%), Gaps = 5/378 (1%)
Strand = Plus / Plus
Query: 1 atggagaatttgatttctctggttaataaaatacagagagcttgtacggctctcggtgat 60
|||||||||||||| || | || ||||| ||||||||||| || ||||| || || |||
Sbjct: 1 atggagaatttgatatcattagtgaataagatacagagagcgtgcacggcgcttggcgat 60
Query: 61 catggtgaagcaagcgcattgcctactctctgggactccttgcctgctattgcggtcgtc 120
||||| |||| ||||||||||||||||| |||||||| || ||| | ||||| |||||
Sbjct: 61 catggcgaagagagcgcattgcctactctttgggactctttaccttccattgctgtcgtt 120
Query: 121 ggtggccagagttcaggaaagtcttcagtgttggagagcgttgttgggaaggacttttta 180
||||||||||||||||| |||||||||||| |||||||| | ||||| |||||||||||
Sbjct: 121 ggtggccagagttcagggaagtcttcagtgctggagagcatcgttggaaaggactttttg 180
Query: 181 cctcgtggatctggaattgttacacgacggcctcttgtgttgcagcttcacaagag-tga 239
|||||||| | || |||||||| || || |||||||| ||||||||||| |||| |||
Sbjct: 181 cctcgtggggcagggattgttacgcggcgtcctcttgtcctgcagcttcac-agagttga 239
Query: 240 tgaaggtagcagagaatatgcagagttccttcacctcccaaggaaaaggttcaccgattt 299
|||| | | ||||||||| ||||| | ||||||||||| || | |||| |||||
Sbjct: 240 cgaag---gaaaagaatatgccgagtttatgcacctcccaagaaagaaattcagtgattt 296
Query: 300 tgctgctgtgcggaaagagattcaggatgagactgatcgagagactgggcgcacaaaaca 359
||||||||| |||| || || || ||||| |||||||||||||| |||| |||||
Sbjct: 297 cgctgctgtgaggaaggaaatctccgacgagacagatcgagagactggccgcagcaaaca 356
Query: 360 aatctctagtgttccaat 377
||| |||| |||||||||
Sbjct: 357 aatttctactgttccaat 374
>27647.m000182 dynamin, putative
Length = 1869
Score = 99.6 bits (50), Expect = 1e-20
Identities = 77/86 (89%)
Strand = Plus / Plus
Query: 118 gtcggtggccagagttcaggaaagtcttcagtgttggagagcgttgttgggaaggacttt 177
||||||||||||||||| || || |||||||||||||| ||||| ||||||| || |||
Sbjct: 121 gtcggtggccagagttctgggaaatcttcagtgttggaaagcgtagttgggagagatttt 180
Query: 178 ttacctcgtggatctggaattgttac 203
|| |||||||||||||||||||||||
Sbjct: 181 ttgcctcgtggatctggaattgttac 206
>29709.m001211 dynamin, putative
Length = 1857
Score = 60.0 bits (30), Expect = 1e-08
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 110 ttgcggtcgtcggtggccagagttcaggaaagtcttcagtgttggagagc 159
|||| ||||| ||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 122 ttgccgtcgttggtggacagagttcaggaaaatcttctgtgttggagagc 171