Jatropha Genome Database

JcCB0034461.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0034461.10 - phase: 0 
         (561 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008726 conserved hypothetical protein                          141   5e-33

>30128.m008726 conserved hypothetical protein
          Length = 552

 Score =  141 bits (71), Expect = 5e-33
 Identities = 162/191 (84%), Gaps = 6/191 (3%)
 Strand = Plus / Plus

                                                                       
Query: 357 tccaaagaaagttgttagcataaatgacagggtagaggagatagatacaagtaagaagag 416
           ||||||||||  ||| ||||| | |||||||||||||||||| |||||||| ||||||| 
Sbjct: 348 tccaaagaaatctgtcagcattagtgacagggtagaggagattgatacaagaaagaaga- 406

                                                                       
Query: 417 gataagaaggaagaagtcaaaggaaaatttgacttcatttgagcaagaagaagaagagcc 476
             ||||||| ||||| ||||| |||||| |||  |   ||||| ||||||||||||||||
Sbjct: 407 --taagaagaaagaaatcaaaagaaaatctgatcttggttgaggaagaagaagaagagcc 464

                                                                       
Query: 477 taaacccttgaagtcaattctcaaggtgggttctttttcaggtgaa---aaatcaaattc 533
            ||||| ||||  |||||||||||||||||||| | ||||||||||   |||||||||||
Sbjct: 465 caaacctttgagatcaattctcaaggtgggttcctattcaggtgaaaacaaatcaaattc 524

                      
Query: 534 ttttgttaatc 544
           |||||||||||
Sbjct: 525 ttttgttaatc 535