Jatropha Genome Database
- JcCB0033831.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0033831.10 + phase: 0
(1152 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27538.m000327 Auxin response factor, putative 256 3e-67
30078.m002329 Auxin response factor, putative 165 7e-40
27494.m000045 Auxin response factor, putative 157 2e-37
>27538.m000327 Auxin response factor, putative
Length = 2130
Score = 256 bits (129), Expect = 3e-67
Identities = 516/644 (80%), Gaps = 12/644 (1%)
Strand = Plus / Plus
Query: 1 atgaaagagttggataagggcttggatccgcagttatggcacgcctgcgccggaagtatg 60
|||||||| |||| ||| | |||||||| ||| ||||||| ||||| || ||||| |||
Sbjct: 1 atgaaagaagtggaaaagaggttggatccacagctatggcatgcctgtgcaggaagcatg 60
Query: 61 gtacagatccctcctattaactccaaagtcttctacttcccacaaggccacgccgagcac 120
|| ||||||||||| ||||| || |||||||| |||||||| |||||||| ||||||||
Sbjct: 61 gttcagatccctccaattaattcgaaagtcttttacttccctcaaggccatgccgagcat 120
Query: 121 tctcaatcgcctgtggatttctcctcctccccgcgaattcatgctctgatcctttgccgt 180
||||||||||| || |||||||| || |||| | | |||| |||||||| |
Sbjct: 121 tctcaatcgccggttgatttctcttcaa------gaatcccttctcttgtcctttgcaga 174
Query: 181 gtcgccgccgtcaaatatctagccgattcagaaaccgatgaagtgtacgcgaagattagc 240
||||||| || || || || || ||||||||||| |||||||| || || ||||||||
Sbjct: 175 gtcgccggagttaagtaccttgctgattcagaaactgatgaagtatatgcaaagattagt 234
Query: 241 ttattcccattaccaaacaacgagcttaattttggagaagaaatgggtatttgcgataat 300
| || ||||| |||| || |||||| ||||||| || ||||| ||| | || |||| |
Sbjct: 235 ctttttccattgccaagtaatgagcttgattttggtgatgaaattggtttatgtgatact 294
Query: 301 aata---atggcaataa---cacagaaaagccagcttcttttgcaaaaacattaactcaa 354
| || |||| | ||| |||||||||||| |||||||||| || |||||||| |||
Sbjct: 295 agtactaatggtactaatagcacagaaaagcctacttcttttgctaagacattaacccaa 354
Query: 355 tcagatgctaacaatggtggaggtttctctgttccacgatactgtgcagaaacgatattt 414
|| |||||||| |||||||| ||||| ||||| ||| |||| ||||| || || || |||
Sbjct: 355 tctgatgctaataatggtggcggtttttctgtgccaagatattgtgctgagactattttt 414
Query: 415 cctcggttagattattccgcggatccgccagtgcaaacagtggttgctaaagatgtgcac 474
|| || || ||||| || || ||||| || || || || || |||||||| ||||| ||
Sbjct: 415 ccccgtttggattactctgctgatccaccggttcagacggttgttgctaaggatgttcat 474
Query: 475 ggcgaggtatggaagttcaggcatatttataggggaacaccaagaaggcatttattgact 534
|| ||| |||||||||||||||||||||||||||| ||||||||||||||| | || |||
Sbjct: 475 ggtgagatatggaagttcaggcatatttatagggggacaccaagaaggcatctgttaact 534
Query: 535 actggatggagtacttttgttaatcaaaagaaattagttgctggagattcaattgtattt 594
||||| ||||||||||| || || || || || ||||| ||||| ||||||||||| |||
Sbjct: 535 actggttggagtactttcgtaaaccagaaaaagttagtagctggtgattcaattgtgttt 594
Query: 595 ttaagagcagaaagcggcgatctttgcctcggaatccgccgtgc 638
|||||||| ||||| || ||||| || | || |||||||||||
Sbjct: 595 ttaagagctgaaagtggtgatctctgtgttggtatccgccgtgc 638
Score = 200 bits (101), Expect = 1e-50
Identities = 230/273 (84%)
Strand = Plus / Plus
Query: 807 ggctgaagaggtattagaggcggcggcgcttgcggccaacggacagccgtttgaggcggt 866
|||||||||||| || ||| | || || ||||| ||||| ||||| |||||||||| ||
Sbjct: 810 ggctgaagaggttttggagtcagcagctcttgctgccaatggacaaccgtttgaggttgt 869
Query: 867 ttattatccaagagcaagtacgcctgagttttgtgttaaggcatcttcagttagggctgc 926
||| |||||| | ||||| || || ||||||||||||||||| ||||| ||||| ||| |
Sbjct: 870 ttactatccacgggcaagcacaccagagttttgtgttaaggcctcttcggttagagcttc 929
Query: 927 aatgagaattcagtggtgttgtggtatgaggtttaagatggcgtttgaaacagaggattc 986
| || || |||||||| | ||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 930 gaccaggatccagtggtgctctggaatgaggtttaagatggcctttgagacagaggattc 989
Query: 987 ttcaaggattagttggtttatgggaactgttgcatctgttcaagttgctgatcccattcg 1046
|||||||||||| ||||| ||||| ||| |||| |||||||| || |||||||| |||||
Sbjct: 990 ttcaaggattagctggttcatgggtactattgcttctgttcaggtggctgatccgattcg 1049
Query: 1047 ctggcctaattctccttggcggcttcttcaggt 1079
||||||||||| |||||||| ||||| |||||
Sbjct: 1050 gtggcctaattcaccttggcgacttctccaggt 1082
>30078.m002329 Auxin response factor, putative
Length = 2109
Score = 165 bits (83), Expect = 7e-40
Identities = 245/299 (81%)
Strand = Plus / Plus
Query: 322 aagccagcttcttttgcaaaaacattaactcaatcagatgctaacaatggtggaggtttc 381
||||| ||||||||||| || ||||| |||||||| ||||| || |||||||||||||||
Sbjct: 358 aagcctgcttcttttgctaagacattgactcaatctgatgccaataatggtggaggtttc 417
Query: 382 tctgttccacgatactgtgcagaaacgatatttcctcggttagattattccgcggatccg 441
|| || ||| | ||||| || || || || ||||| |||| ||||| || || ||||||
Sbjct: 418 tcggtgccaaggtactgcgcggagactatttttccgaggttggattactcagctgatccg 477
Query: 442 ccagtgcaaacagtggttgctaaagatgtgcacggcgaggtatggaagttcaggcatatt 501
|| || || || | ||||||| ||||| || || || ||||||||| || ||||||
Sbjct: 478 cctgttcagaccattcttgctaaggatgttcatggagaaacatggaagtttagacatatt 537
Query: 502 tataggggaacaccaagaaggcatttattgactactggatggagtacttttgttaatcaa 561
||||| ||||||||||| |||||| | || ||||||||||||||||||||||| |||||
Sbjct: 538 tatagaggaacaccaaggaggcatcttttaactactggatggagtacttttgtgaatcat 597
Query: 562 aagaaattagttgctggagattcaattgtatttttaagagcagaaagcggcgatctttg 620
||||| |||||||| || || || || ||||||||||||||||| | ||| ||||||||
Sbjct: 598 aagaagttagttgcaggggactctatagtatttttaagagcagagaacggagatctttg 656
Score = 123 bits (62), Expect = 2e-27
Identities = 92/102 (90%)
Strand = Plus / Plus
Query: 939 gtggtgttgtggtatgaggtttaagatggcgtttgaaacagaggattcttcaaggattag 998
|||||||| || ||||||||||| ||||| |||||||| |||||||||||| |||||||
Sbjct: 981 gtggtgttcggggatgaggtttaaaatggcatttgaaactgaggattcttcacggattag 1040
Query: 999 ttggtttatgggaactgttgcatctgttcaagttgctgatcc 1040
||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 1041 ctggtttatgggaactattgcttctgttcaagttgctgatcc 1082
>27494.m000045 Auxin response factor, putative
Length = 1773
Score = 157 bits (79), Expect = 2e-37
Identities = 181/215 (84%)
Strand = Plus / Plus
Query: 865 gtttattatccaagagcaagtacgcctgagttttgtgttaaggcatcttcagttagggct 924
||||| ||||||||||||||||| || || |||||||||| ||| || |||| |||||
Sbjct: 883 gtttactatccaagagcaagtactccagaattttgtgttagggcctcggcagtgagggcc 942
Query: 925 gcaatgagaattcagtggtgttgtggtatgaggtttaagatggcgtttgaaacagaggat 984
|||||| |||||||||||| ||| |||||||| || ||| | ||||| || ||||||
Sbjct: 943 gcaatgcagattcagtggtgtcctgggatgaggttcaaaatgccttttgagactgaggat 1002
Query: 985 tcttcaaggattagttggtttatgggaactgttgcatctgttcaagttgctgatcccatt 1044
|| || ||||||| ||||||||||||||| | | |||||||| ||||||||||||||
Sbjct: 1003 tcatcccggattagctggtttatgggaactatatcttctgttcaggttgctgatcccatc 1062
Query: 1045 cgctggcctaattctccttggcggcttcttcaggt 1079
||||||||||||||||| ||||||||||| |||||
Sbjct: 1063 cgctggcctaattctccgtggcggcttctgcaggt 1097
Score = 69.9 bits (35), Expect = 3e-11
Identities = 113/139 (81%)
Strand = Plus / Plus
Query: 458 ttgctaaagatgtgcacggcgaggtatggaagttcaggcatatttataggggaacaccaa 517
|||| ||||||||||| || ||| |||||||| |||||||||||||| || || || |
Sbjct: 506 ttgccaaagatgtgcatggtgagacttggaagtttaggcatatttatagagggactccta 565
Query: 518 gaaggcatttattgactactggatggagtacttttgttaatcaaaagaaattagttgctg 577
|| | ||| | ||||||||||| ||||||| |||||| || || ||||| | || ||||
Sbjct: 566 gacgacatctgttgactactgggtggagtaattttgtgaaccagaagaagcttgtagctg 625
Query: 578 gagattcaattgtattttt 596
|||| |||||||| |||||
Sbjct: 626 gagactcaattgtgttttt 644