Jatropha Genome Database

JcCB0033761.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0033761.10 + phase: 0 
         (678 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30106.m000644 conserved hypothetical protein                          180   7e-45

>30106.m000644 conserved hypothetical protein
          Length = 753

 Score =  180 bits (91), Expect = 7e-45
 Identities = 235/283 (83%)
 Strand = Plus / Plus

                                                                       
Query: 212 ctcctcccaagcgtcagcgaaacgggatccctgctacttctggcaaagtctcgaaacgca 271
           ||||||| ||||| ||||||||||||||||| ||| || |||||||  ||||||||||||
Sbjct: 296 ctcctcctaagcgccagcgaaacgggatcccagctgctactggcaagttctcgaaacgca 355

                                                                       
Query: 272 agtctcgcgcgtccaagcgttctcagactacgtttataactgcggatccggcgaatttca 331
           ||||||| ||||| ||  | ||||||||||| |||||| ||||||||||||| || ||||
Sbjct: 356 agtctcgtgcgtctaaaaggtctcagactacctttatatctgcggatccggccaacttca 415

                                                                       
Query: 332 ggcagatggtgcaacaggttactggtgtgagattcggtaacgcccagttgccacctgtcc 391
           |||||||||||||||||||||| || || ||| | | |||| ||||||| ||    || |
Sbjct: 416 ggcagatggtgcaacaggttaccggcgttagactggataactcccagttccctgtcgtac 475

                                                                       
Query: 392 ctgtgctcaagcctgagccacagagacctggtacccgcctccatgcagctgccggatgct 451
           ||||||| || |||||||| |||||||| |||| |||  | | ||  ||| ||||  |||
Sbjct: 476 ctgtgcttaaacctgagcctcagagaccaggtagccgtttgcgtggcgctcccggtggct 535

                                                      
Query: 452 tgcccactctcgatacatctgcgtttttgctggatcatcatca 494
           |||| ||||| ||||| || ||||||||||| |||||||||||
Sbjct: 536 tgccgactctggatacgtcggcgtttttgctcgatcatcatca 578



 Score = 73.8 bits (37), Expect = 1e-12
 Identities = 96/115 (83%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                       
Query: 7   aacttggccagtttggaaccattcctcttcaga---acttttcaggactcatggatttct 63
           |||||||||||||| ||||||||  ||||||||   || ||||  ||||||||||| |||
Sbjct: 16  aacttggccagttttgaaccatttttcttcagacacacctttcctgactcatggatatct 75

                                                                  
Query: 64  gaagcctatgctcgcgacaccgaaactctaactaaagccctccagaaatcactct 118
           ||||| |||||||| || |||||  |  |||| ||||||||||||||||| ||||
Sbjct: 76  gaagcttatgctcgtgataccgatgccttaacaaaagccctccagaaatccctct 130



 Score = 69.9 bits (35), Expect = 2e-11
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                       
Query: 598 gctgatggcgggcctactgctgggctagactatgacactttttccagctttcccactcta 657
           |||||||| ||||||| |||||||||||| |  ||||||||||| |||||||| || || 
Sbjct: 673 gctgatggtgggcctagtgctgggctagagttcgacactttttctagctttcctacactt 732

                              
Query: 658 gagtcatggaaagttatgt 676
           |||||  ||||||||||||
Sbjct: 733 gagtcggggaaagttatgt 751