Jatropha Genome Database

JcCB0033501.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0033501.30 + phase: 1 /pseudo/partial
         (1457 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27985.m000845 serine-threonine protein kinase, plant-type, putative   115   8e-25
27985.m000847 serine-threonine protein kinase, plant-type, putative    84   3e-15
27985.m000846 serine-threonine protein kinase, plant-type, putative    58   2e-07

>27985.m000845 serine-threonine protein kinase, plant-type, putative
          Length = 2496

 Score =  115 bits (58), Expect = 8e-25
 Identities = 166/202 (82%)
 Strand = Plus / Plus

                                                                        
Query: 850  tcttggacaatttaggataattgatctttcaagtaacaaaataagaggagagattccaag 909
            |||||||| ||| |||||||| ||||||||||| ||  || ||  |||||||||||||||
Sbjct: 1959 tcttggactattgaggataatagatctttcaagaaatgaattacaaggagagattccaag 2018

                                                                        
Query: 910  agaaatagttatcctctcaagtcttagccaattgaacttgtccaataacaagttgagtgg 969
             ||| ||   | |||||||   ||||  |||||||| ||||||||||||||||||| |||
Sbjct: 2019 ggaattatcaagcctctcagagcttaaacaattgaatttgtccaataacaagttgactgg 2078

                                                                        
Query: 970  tgcaatccctaaagaaattgatggcttgaagcaattagagtcactcaatttatctcaaaa 1029
            ||||||| || |||| |||| |  | |||||||||| ||||||||  || | ||||||||
Sbjct: 2079 tgcaatctctcaagagattggtttcctgaagcaattggagtcacttgatctgtctcaaaa 2138

                                  
Query: 1030 tcagctatcatgcagatttcct 1051
            |||||||||| ||||| |||||
Sbjct: 2139 tcagctatcaggcagaattcct 2160



 Score =  113 bits (57), Expect = 3e-24
 Identities = 126/149 (84%)
 Strand = Plus / Plus

                                                                        
Query: 571  tgcaatatcttagcctacaatccaatcaattatctagaagcatgcccttacaattgtgcc 630
            |||||||||||||||||||||| ||||| ||   | ||||||| |||||  || ||||||
Sbjct: 1682 tgcaatatcttagcctacaatcaaatcatttccatggaagcatacccttggaactgtgcc 1741

                                                                        
Query: 631  aattaacaaatgttcaaatattagatctttccataaacaatatcaatgcaaccataccac 690
            ||||||||||||||||||| || ||||| ||  | ||||||||||||| |||||||||||
Sbjct: 1742 aattaacaaatgttcaaattttggatctctctgtgaacaatatcaatggaaccataccac 1801

                                         
Query: 691  accacctcaataatttaagagccatgact 719
            ||  |||||| ||||| | ||| ||||||
Sbjct: 1802 actgcctcaagaatttgaaagcaatgact 1830


>27985.m000847 serine-threonine protein kinase, plant-type, putative
          Length = 771

 Score = 83.8 bits (42), Expect = 3e-15
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                 
Query: 860 tttaggataattgatctttcaagtaacaaaataagaggagagattccaagagaa 913
           |||||||||||||||||||||||||||||||||  |||||||||||| ||||||
Sbjct: 160 tttaggataattgatctttcaagtaacaaaatagaaggagagattccgagagaa 213


>27985.m000846 serine-threonine protein kinase, plant-type, putative
          Length = 1398

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                 
Query: 301  taatctattttctggagtgattcctgatagttttatg 337
            |||||| ||||||||||||||||||||| ||||||||
Sbjct: 1245 taatctgttttctggagtgattcctgatggttttatg 1281