Jatropha Genome Database
- JcCB0033401.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0033401.10 - phase: 0
(2262 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30018.m000545 conserved hypothetical protein 206 4e-52
>30018.m000545 conserved hypothetical protein
Length = 1911
Score = 206 bits (104), Expect = 4e-52
Identities = 398/501 (79%)
Strand = Plus / Plus
Query: 191 ccaagctcttcagcacttacaatggttgtgtctggaagggtaagagattgagacttgaga 250
|||||||||| | |||||||||||| ||||| ||||| ||| ||| ||| |||||| |
Sbjct: 203 ccaagctctttaacacttacaatggatgtgtttggaaaggtgggaggctgaaacttgaca 262
Query: 251 aggcaaaagaacattatcttgatcgtttgaagcaggaatgggctgaagatgctcaacttg 310
|||| |||||||||||||||||||| ||||||| |||||||||||||| || || ||||
Sbjct: 263 aggctaaagaacattatcttgatcgcttgaagcgcgaatgggctgaagacgcacagcttg 322
Query: 311 caagtagtacatatactgctgctgccgatgatgacacggataagaatatggagtctttca 370
| | |||||||| || || || || | || | || |||||||| | |||||||||
Sbjct: 323 cgaatagtacatgtagtgatgatgtcaataacgatgcggataagcagatggagtctccac 382
Query: 371 aaaagcccatgaaagagctcagttcagaaaagaagcagctgcggannnnnnncccaaggt 430
|||| ||| |||||| ||||||| || |||||||| ||| || |||||| |
Sbjct: 383 gaaagaccaagaaagacctcagtttggataagaagcaactgaggcttttcttcccaagat 442
Query: 431 tgcaaaagttgaaatcactgccattcagtggaactggcaagcacagatacagtttcagac 490
| |||||| |||||||| | ||||||||||||||||| ||||| | ||||||||| ||||
Sbjct: 443 tacaaaagctgaaatcaataccattcagtggaactgggaagcataaatacagttttagac 502
Query: 491 gtgttgaagttcctcctctccctacacatttctgtgattgtgaggaacattcaggttctg 550
|||||||||||||| |||| || ||||||||||||||||| || ||||| ||||||
Sbjct: 503 gtgttgaagttccttctcttccattgcatttctgtgattgtgaagagcattctggttctc 562
Query: 551 tctatactactgnnnnnnnngcaattcctgttctggaagaacaaggtggtgggatgagta 610
| || || || ||||||||||| |||||||||||||||||| | | |
Sbjct: 563 ttcatgctcctaaaggaaaacagattcctgttctcgaagaacaaggtggtggggtaaatc 622
Query: 611 aggaagaacttgatatgatgaactctgtgatgaataagctctttgagatagaaaatgttt 670
|||||||||||||| |||||| ||||||||||||| ||| ||||||||||||||||| |
Sbjct: 623 aggaagaacttgatttgatgatttctgtgatgaataggctgtttgagatagaaaatgtct 682
Query: 671 cagccactgcacatagtgaca 691
||| || ||||||||||||
Sbjct: 683 caggtgctccacatagtgaca 703
Score = 99.6 bits (50), Expect = 7e-20
Identities = 149/182 (81%)
Strand = Plus / Plus
Query: 1688 tggaagggcctgcagaaactcagcctaccaaacaggattctgcttcgaatgagacaggga 1747
||||||| | ||||||| ||||| ||||||| ||||| |||||| || || |||| |
Sbjct: 1274 tggaaggtcttgcagaagctcaggataccaaaatggattttgcttcagataaggcaggca 1333
Query: 1748 gaggttctgcatggctcaacaaagcttcatggacacaattggtcgctagtaatagtagta 1807
||||||||||||||||| | |||||||||||||||||||||||| |||| || || |
Sbjct: 1334 gaggttctgcatggctccataaagcttcatggacacaattggtcaacagtagtaacagca 1393
Query: 1808 gttcattcagtatcgcccaaatcttgccaggtcttaactttgaaaagcaagagccagtaa 1867
|||||| || ||| | ||||||||||||||| ||| ||||| ||||| ||||||| ||
Sbjct: 1394 attcatttagcatcactcaaatcttgccaggtgttacttttgacaagcatgagccagcaa 1453
Query: 1868 aa 1869
||
Sbjct: 1454 aa 1455
Score = 89.7 bits (45), Expect = 7e-17
Identities = 135/165 (81%)
Strand = Plus / Plus
Query: 1013 aactcattgaaccagagtcaattgccaaacaatcagatcctaagctttcatggtcacaga 1072
|||| |||||| || | ||||||| ||||||||||| |||| |||||||||||||||
Sbjct: 1025 aacttattgaatcacaatcaattgtcaaacaatcagctcctggtgtttcatggtcacaga 1084
Query: 1073 agtcttcttggagagaacttattgggaataagagcagcagtgcaatgaacatatcagata 1132
|||||||||||||||||||| | ||||||| || || | |||||| | || || || |
Sbjct: 1085 agtcttcttggagagaacttgtggggaataggaacaataatgcaatcagtatctctgaca 1144
Query: 1133 tattgcctggaatttcatccaataaggaagagaaatccaagtctg 1177
|||||||||| ||||| | |||||||||||| || |||| ||||
Sbjct: 1145 tattgcctggtatttctgctaataaggaagaggaaaccaaatctg 1189
Score = 71.9 bits (36), Expect = 2e-11
Identities = 75/88 (85%)
Strand = Plus / Plus
Query: 2167 ggtgagagttgctcatttatgaggacagatgcatcattgaaagagtgggaaaatattaaa 2226
||||||| | || ||||||||||||| || | |||| | |||||||||| |||||||| |
Sbjct: 1807 ggtgagactcgcccatttatgaggactgaggaatcagttaaagagtgggcaaatattaga 1866
Query: 2227 gcagctcttagtggatcacgcaagagaa 2254
|||||||| ||||| |||||||| ||||
Sbjct: 1867 gcagctctaagtgggtcacgcaaaagaa 1894