Jatropha Genome Database
- JcCB0031871.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0031871.20 + phase: 0 /pseudo
(619 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013956 conserved hypothetical protein 240 8e-63
29848.m004616 conserved hypothetical protein 224 5e-58
>30170.m013956 conserved hypothetical protein
Length = 447
Score = 240 bits (121), Expect = 8e-63
Identities = 241/281 (85%)
Strand = Plus / Plus
Query: 338 gtaatgccagcttttggagtccaatttgaaacacactatacaagtggaaggattgtccga 397
|||||||||||||||||||||||| ||||||||||||||| |||||||| |||| ||
Sbjct: 163 gtaatgccagcttttggagtccaacttgaaacacactatatgagtggaagaattgatcgc 222
Query: 398 cactttgttccaattggcaagattttgaaacctgtgctgctagaatgcgtgactcctata 457
| |||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| |
Sbjct: 223 cgctttattccaattggcaagattctgaaacctgtgctgctagaatgcgttactccagtt 282
Query: 458 acttgttactggagcctatctttgattttgcatggggaaggagaactaatgttggtattt 517
||||||||||||||||| |||||||| |||||||||||| |||||||| ||||| ||
Sbjct: 283 acttgttactggagcctgtctttgatattgcatggggaaacagaactaaccttggttttc 342
Query: 518 aaggaattgtatccacctgtgaagatgttggtccctatctggaaggccttgtgtagtgcc 577
|||||||| || ||||| |||||| |||| |||||||||||||| ||||||||||||
Sbjct: 343 aaggaattacgacctcctgtcaagatgctggtacctatctggaaggcattgtgtagtgcc 402
Query: 578 actggcaatgaagaaagctcagtcacatctacagaagatgg 618
|||||| |||||| || | ||||||| ||||||||||
Sbjct: 403 tctggcagcaaagaaaacttgggcacatctgcagaagatgg 443
>29848.m004616 conserved hypothetical protein
Length = 543
Score = 224 bits (113), Expect = 5e-58
Identities = 239/281 (85%)
Strand = Plus / Plus
Query: 338 gtaatgccagcttttggagtccaatttgaaacacactatacaagtggaaggattgtccga 397
|||||||||||||||||||||||| ||||||||||||||| |||||||| |||| ||
Sbjct: 259 gtaatgccagcttttggagtccaacttgaaacacactatatgagtggaagaattgatcgc 318
Query: 398 cactttgttccaattggcaagattttgaaacctgtgctgctagaatgcgtgactcctata 457
| |||||||||||||||||||||| ||||||||||||||||||||||| | |||| |
Sbjct: 319 ctctttgttccaattggcaagattctgaaacctgtgctgctagaatgcattactctagtt 378
Query: 458 acttgttactggagcctatctttgattttgcatggggaaggagaactaatgttggtattt 517
||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||
Sbjct: 379 cattgttactggagcctgtctttgattttgcatggggagacagaactaatgttggttttc 438
Query: 518 aaggaattgtatccacctgtgaagatgttggtccctatctggaaggccttgtgtagtgcc 577
| |||||| || ||||| |||||| |||| |||||||||||||| ||||| ||||||
Sbjct: 439 agggaattacggcctcctgtcaagatgctggtacctatctggaaggcattgtgcagtgcc 498
Query: 578 actggcaatgaagaaagctcagtcacatctacagaagatgg 618
|||||| |||||| || | ||||||||||||||||||
Sbjct: 499 tctggcagcaaagaaaactgggacacatctacagaagatgg 539
Score = 65.9 bits (33), Expect = 3e-10
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 11 tgtccattactgatcgaagatatacttacattcatgactgtaaatggccttccgaagcaa 70
|||||||| || |||| |||||||||||||| ||||| ||||||| |||||| |||| |
Sbjct: 2 tgtccattgctaatcgcagatatacttacatacatgattgtaaattgccttctaaagcca 61
Query: 71 ttgacgtgcaccatattgtagttcggaagagca 103
|| || |||||| ||| ||||||| |||||||
Sbjct: 62 ttaacacgcaccacattatagttcgaaagagca 94