Jatropha Genome Database

JcCB0031431.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0031431.10 - phase: 0 
         (354 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29629.m001436 RALFL33, putative                                       232   1e-60

>29629.m001436 RALFL33, putative
          Length = 345

 Score =  232 bits (117), Expect = 1e-60
 Identities = 256/302 (84%), Gaps = 9/302 (2%)
 Strand = Plus / Plus

                                                                       
Query: 46  acccatttctcaatttgtaatggggtttcagtttcaggcctcaattcacttgaaatcact 105
           |||| |||| ||||||| ||||||||||||||||||||| ||||       |||  ||||
Sbjct: 46  acccttttcacaatttgcaatggggtttcagtttcaggcttcaa-------gaa--cact 96

                                                                       
Query: 106 gaaattgatgctattgtgagtaggccttgtaccaggaaaattggagactgccttgaagag 165
           ||  ||||||| ||  |||| |||  ||| |||| |||||||||||||||| ||||||||
Sbjct: 97  gaggttgatgcaatcatgaggagggtttgcaccaagaaaattggagactgctttgaagag 156

                                                                       
Query: 166 gcagagatggagtcagagattagcaggagagttcttttgatgcaaaagaagtacataagc 225
            | || |||||||||||||| ||||||||||||||| |||||||||||||||||||||| 
Sbjct: 157 ccggaaatggagtcagagatcagcaggagagttcttgtgatgcaaaagaagtacataagt 216

                                                                       
Query: 226 tacgagacactgaagagagacatggttccatgtgcaaagccaggagcttcttactatgat 285
           || |||||| ||||||| || |||||||||||||  || ||||| || ||||||||||||
Sbjct: 217 tatgagacattgaagagggatatggttccatgtgacaaaccaggtgcatcttactatgat 276

                                                                       
Query: 286 tgtcatgctggagaagctaatccttatagcagaggttgtgaggtcattacaagatgtaga 345
           |||||||||||||| ||||||||||| || |||||||||||  | |||||||| ||||||
Sbjct: 277 tgtcatgctggagaggctaatccttacagtagaggttgtgaaatgattacaaggtgtaga 336

             
Query: 346 gg 347
           ||
Sbjct: 337 gg 338