Jatropha Genome Database
- JcCB0030731.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0030731.10 + phase: 0
(1227 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29866.m000621 conserved hypothetical protein 285 3e-76
>29866.m000621 conserved hypothetical protein
Length = 2004
Score = 285 bits (144), Expect = 3e-76
Identities = 222/248 (89%)
Strand = Plus / Plus
Query: 184 atggtattgagagtattgttggtggaagctgatgattctactaggcaaattatagctgct 243
||||||||||||||||| || || ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 124 atggtattgagagtattattagttgaagctgatgattctaccaggcagattattgctgct 183
Query: 244 ctgctcaggaaatgcagttacaaagttgttgctgttccagatggcttaaaggcatgggag 303
|| || |||||||| || |||||||||| |||||||| |||||||||||||||||||||
Sbjct: 184 cttcttaggaaatgtagctacaaagttgccgctgttcctgatggcttaaaggcatgggag 243
Query: 304 atgctgagaggaaggccccataaaatagaccttattttgacagaagttgatttaccttca 363
||||| | ||||| |||||||| |||||||| |||||||||||||| || |||||||||
Sbjct: 244 atgctcaaaggaaaaccccataatatagacctcattttgacagaagtggaattaccttca 303
Query: 364 atatctggatatgcgcttctttctctaattacggagcatgagatctgcaaaaacatacca 423
|||||||||||||| |||||| | ||||||| |||||||||||| |||||||||||||||
Sbjct: 304 atatctggatatgcccttcttacactaattatggagcatgagatttgcaaaaacatacca 363
Query: 424 gttataat 431
||||||||
Sbjct: 364 gttataat 371
Score = 123 bits (62), Expect = 3e-27
Identities = 142/168 (84%), Gaps = 3/168 (1%)
Strand = Plus / Plus
Query: 609 ccaagatgaaagtgttggacaggataaggtagaggctacttcagaaaataatgctgccag 668
|||||| ||||||||||||||||||| || ||||||||||| ||||||||| ||| ||
Sbjct: 525 ccaagaggaaagtgttggacaggatacggctgaggctacttctgaaaataatcctgagag 584
Query: 669 taatcattcaagtggcaacatggcttgtattcaacaaaataaagaattcattgagaaagg 728
||||||||||||||| || ||||| || ||||| | |||||||| | ||||||||||
Sbjct: 585 taatcattcaagtggtgacgtggctcgtcttcaaaataataaagatt---ttgagaaagg 641
Query: 729 aagtgatgctcagagctcttgtacaaagccagatgcagaagctgagag 776
|||||| ||||||| ||||| |||||||||||| |||||||||||
Sbjct: 642 gagtgattctcagagttcttgcacaaagccagatttggaagctgagag 689
Score = 105 bits (53), Expect = 6e-22
Identities = 98/113 (86%)
Strand = Plus / Plus
Query: 473 tgatgtcctcacaggatgcaactaatacggtttacaagtgcatgttgagaggtgctgctg 532
||||||||||||| ||| || || ||| |||||||| |||||| || ||||||| ||||
Sbjct: 371 tgatgtcctcacaagattcagttagtacagtttacaaatgcatgatgcgaggtgcagctg 430
Query: 533 actatcttgttaaacctatacggaaaaatgaactgagaaatttgtggcagcat 585
||||| | ||||| || ||| ||||||||||||||||||||||||||||||||
Sbjct: 431 actatttggttaagccgataaggaaaaatgaactgagaaatttgtggcagcat 483
Score = 103 bits (52), Expect = 2e-21
Identities = 285/362 (78%), Gaps = 3/362 (0%)
Strand = Plus / Plus
Query: 867 tggtcagaaattggttatgcatgagaatcaagccgggggatcaggtgtggctgcctgcaa 926
||||||||| || || ||||||||||| | || ||||| || | |||||||||||||||
Sbjct: 789 tggtcagaaggtgcttttgcatgagaatgatgctgggggttctgctgtggctgcctgcaa 848
Query: 927 ggattctaacagaatgaccgtgcatgaggatattgaaccagaaagtcaaaggatgaatgc 986
|||||| ||| ||||| ||| |||||||| |||| |||||||||||||| | |||||
Sbjct: 849 ggattccaaccaaatgattgtgaatgaggatgttgagccagaaagtcaaagaacaaatgc 908
Query: 987 taatgacatccatgaggcctacgacaacaaccatgtccacgtcaacttttctagagaagc 1046
|| || | ||||||||| ||| |||| || || ||||||| ||||| ||||||
Sbjct: 909 caagatcacctatgaggcctgtgaccacaattatttctttgtcaactcttctaaagaagc 968
Query: 1047 tattgatttcatgggaacatctgctagtcacaattcttc---ggacaatgtcaaaagcaa 1103
|||||||||||||||| |||| ||| ||||||| ||||| ||| ||| |||||||||
Sbjct: 969 tattgatttcatgggagcatcagctggtcacaagtcttcattggataataccaaaagcaa 1028
Query: 1104 gttcgatatttcttcacacttggatctgtgcttaacaggacataatcctagtggctttga 1163
|| ||| || | || |||||||||||||| ||| ||| || | |||||||||||
Sbjct: 1029 atttgattttgtgccccaattggatctgtgcttgacaagacgccattcaagtggctttga 1088
Query: 1164 aattcaacatccagaagaaagatgtactctcaggatttctaatgcttcagcatttactcg 1223
|||||| | |||||| | | ||||||||||| ||| |||||||||||||||| ||
Sbjct: 1089 gattcaagttttagaagatacacgtactctcaggcattcccatgcttcagcatttacgcg 1148
Query: 1224 gt 1225
||
Sbjct: 1149 gt 1150