Jatropha Genome Database

JcCB0030711.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0030711.30 + phase: 0 /partial
         (795 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29640.m000411 Trigger factor, putative                                525   e-148

>29640.m000411 Trigger factor, putative
          Length = 1629

 Score =  525 bits (265), Expect = e-148
 Identities = 442/501 (88%)
 Strand = Plus / Plus

                                                                       
Query: 295 gagcccaattcaagattgaggttgactgtagaagtcccagaagctgtatgcgatgattgt 354
           ||||||||||||| ||| |||||||| |||||||| ||    ||||| || |||||||||
Sbjct: 292 gagcccaattcaacattaaggttgaccgtagaagttcctcctgctgtttgtgatgattgt 351

                                                                       
Query: 355 tacagcagggtcatgaatgagttcatgaagcaagctagggtaccgggttttcgtcctgga 414
           ||||  ||||||||||||||||||||||||||||||| | | || || ||||||||||||
Sbjct: 352 tacaaaagggtcatgaatgagttcatgaagcaagctaagatccccggatttcgtcctgga 411

                                                                       
Query: 415 aagaatgttccagaaagtattcttctaagttatgttggaaaggaaaatgttcagaaggct 474
           |||||||||||||| ||||||||| | ||||||||||| |||||||||||||||||||| 
Sbjct: 412 aagaatgttccagagagtattcttatgagttatgttggcaaggaaaatgttcagaaggcg 471

                                                                       
Query: 475 acaattgaatctgttttgaagaggacacttccacatgccatgtcttcggtgactggaagg 534
           ||| |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 472 acagttgagtctgttttgaagaggacccttccacatgcgatgtcttcggtgactggaagg 531

                                                                       
Query: 535 gctttgagagactccatccgcattgtaactaaattctctgacatggagaaggcctattct 594
           ||| ||| ||||||  | ||||||| ||| |||||||| ||||||||||||| |||||||
Sbjct: 532 gctctgaaagactcagttcgcattgcaacgaaattctccgacatggagaaggactattct 591

                                                                       
Query: 595 tcactcaatactctcagatatgatattattgtggatgtggcacctgaagtcaaatggatc 654
           || |||||  |||||||||||||| ||||||| |||||||||||||||||||||||||| 
Sbjct: 592 tctctcaactctctcagatatgatgttattgtagatgtggcacctgaagtcaaatggatg 651

                                                                       
Query: 655 cctgagaatgcgtacaaaattctgaagattgttgttgaaattgacagtgatgtagatgct 714
            | |||||||| ||||||| | ||||||||||||||||||| ||||||||| | ||||| 
Sbjct: 652 tcggagaatgcatacaaaaatttgaagattgttgttgaaatagacagtgatattgatgcg 711

                                                                       
Query: 715 cagacagcttctgaaaaagaattaaggcgtcgtcaaaagtcccttggcgcaatgagaatt 774
           | || ||||||||||||||||||||| |  |||||||| |||||||| ||| ||| ||||
Sbjct: 712 ctgagagcttctgaaaaagaattaagacaccgtcaaaaatcccttggtgcactgaaaatt 771

                                
Query: 775 gtaactgacagaggactgcag 795
           |||||||||||||||||||||
Sbjct: 772 gtaactgacagaggactgcag 792